Protein–RNA interactions for Protein: Q9NUQ8

ABCF3, ATP-binding cassette sub-family F member 3, humanhuman

Predictions only

Length 709 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3Q9NUQ8 SYNC-202ENST00000409190 3398 ntAPPRIS P3 TSL 2 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 AL357673.1-201ENST00000637610 2542 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 GNA13-201ENST00000439174 4922 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 HAS3-205ENST00000569188 2170 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 AL162727.3-201ENST00000635661 2787 ntBASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 C3orf58-201ENST00000315691 4346 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 TSPY14P-201ENST00000303979 915 ntBASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 CDKN2A-213ENST00000579122 666 ntTSL 3 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 AL023803.3-201ENST00000615559 522 ntBASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 CLN6-221ENST00000637494 765 ntTSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 CNTNAP3B-201ENST00000276974 3240 ntTSL 5 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC18.13■□□□□ 0.49
ABCF3Q9NUQ8 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 GPANK1-202ENST00000375895 1800 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 GPANK1-204ENST00000375900 1814 ntAPPRIS P1 TSL 2 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 SEC61A2-201ENST00000298428 1893 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 PIGP-207ENST00000464265 3437 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 MGAT2-201ENST00000305386 2687 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 RAB17-201ENST00000264601 1966 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 NEIL2-202ENST00000403422 2016 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 LINC01554-202ENST00000436592 2052 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 OOEP-AS1-201ENST00000445350 463 ntTSL 3 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 RPS20-210ENST00000523936 899 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 TBX6-203ENST00000553607 2162 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 AC092338.2-201ENST00000568827 1415 ntBASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 GATA6-201ENST00000269216 3770 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 DNAJC28-201ENST00000314399 1625 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 SLC45A1-202ENST00000471889 2784 ntTSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 ANXA3-201ENST00000264908 1657 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 MYH14-203ENST00000425460 6811 ntAPPRIS P3 TSL 5 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 GUCA1A-201ENST00000053469 1874 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC18.12■□□□□ 0.49
ABCF3Q9NUQ8 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 SLC2A14-202ENST00000396589 2335 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 CCT6A-201ENST00000275603 2719 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 AGAP6-201ENST00000374056 2703 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 SEC23A-203ENST00000545328 2734 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 DAB2IP-205ENST00000408936 6784 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 DHRS4L2-202ENST00000397071 1117 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 IGHMBP2-205ENST00000539224 785 ntTSL 3 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 TMEM249-203ENST00000565365 975 ntAPPRIS P2 TSL 3 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 DHRS4-201ENST00000313250 1443 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 GNAI2-204ENST00000440628 1663 ntTSL 5 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 CLN3-206ENST00000360019 1840 ntTSL 2 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 TBC1D3I-202ENST00000618620 1900 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 MAGED4-211ENST00000599522 2669 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 SQLE-201ENST00000265896 2961 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 ELF2-204ENST00000394235 4012 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 NAA50-201ENST00000240922 6135 ntAPPRIS P3 TSL 1 (best) BASIC18.11■□□□□ 0.49
ABCF3Q9NUQ8 LINC00595-204ENST00000434974 2692 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 NEK10-202ENST00000341435 2638 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 HSPA1A-201ENST00000375651 2483 ntAPPRIS P1 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 CSK-210ENST00000567571 2443 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 AMN1-201ENST00000281471 2110 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 TNK2-AS1-201ENST00000458180 2096 ntTSL 2 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC18.1■□□□□ 0.49
ABCF3Q9NUQ8 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC18.1■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 42.6 ms