Protein–RNA interactions for Protein: Q9NQE9

HINT3, Histidine triad nucleotide-binding protein 3, humanhuman

Known RBP Predictions only

Length 182 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HINT3Q9NQE9 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 WASF1-205ENST00000392587 2675 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 LMNA-205ENST00000368299 2253 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 CCK-201ENST00000334681 830 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 CLEC18B-206ENST00000620745 1847 ntTSL 5 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 HIBCH-201ENST00000359678 1939 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 CHRNA7-207ENST00000635884 1975 ntTSL 5 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 SEPHS1-201ENST00000327347 3273 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 AUNIP-201ENST00000374298 2116 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 SKIDA1-202ENST00000449193 6598 ntAPPRIS P2 TSL 3 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.09■□□□□ 0.17
HINT3Q9NQE9 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
HINT3Q9NQE9 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.08■□□□□ 0.17
HINT3Q9NQE9 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.17
HINT3Q9NQE9 CDC42EP3-201ENST00000295324 5700 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 BX664615.1-201ENST00000443558 458 ntBASIC16.08■□□□□ 0.16
HINT3Q9NQE9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 AC005606.2-201ENST00000564438 614 ntTSL 2 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 AP5B1-201ENST00000532090 4811 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 SLC22A1-203ENST00000457470 1452 ntTSL 5 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 ABO-203ENST00000611156 1577 ntAPPRIS ALT2 TSL 5 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 JKAMP-201ENST00000261247 1726 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 AL731569.1-201ENST00000428940 3058 ntTSL 2 BASIC16.08■□□□□ 0.16
HINT3Q9NQE9 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 LRRC56-201ENST00000270115 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 MEGF9-201ENST00000373930 6298 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 AL442663.3-201ENST00000554737 1000 ntTSL 3 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 AC024243.1-201ENST00000609234 778 ntBASIC16.07■□□□□ 0.16
HINT3Q9NQE9 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 TSEN34-202ENST00000396383 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 ARHGAP8-202ENST00000356099 1584 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 AC020661.1-201ENST00000503052 1584 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 AL121761.2-201ENST00000598007 1648 ntBASIC16.07■□□□□ 0.16
HINT3Q9NQE9 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 REXO1L11P-201ENST00000620964 1927 ntBASIC16.07■□□□□ 0.16
HINT3Q9NQE9 FBLN7-205ENST00000409903 1989 ntTSL 5 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 ZNF584-209ENST00000599238 2288 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 SNX17-210ENST00000537606 2400 ntTSL 2 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 FAM120AOS-201ENST00000375412 2771 ntAPPRIS P3 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 C4orf32-201ENST00000309733 8901 ntAPPRIS P1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 C12orf56-207ENST00000543942 3242 ntAPPRIS P1 TSL 5 BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC16.07■□□□□ 0.16
HINT3Q9NQE9 RASA2-202ENST00000452898 2562 ntAPPRIS ALT2 TSL 5 BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 ALOX12-201ENST00000251535 2358 ntAPPRIS P1 TSL 1 (best) BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 SMOX-205ENST00000379460 2230 ntAPPRIS P1 TSL 2 BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 PDE3B-201ENST00000282096 6076 ntAPPRIS P2 TSL 1 (best) BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC16.06■□□□□ 0.16
HINT3Q9NQE9 AC009949.1-201ENST00000623048 1830 ntBASIC16.06■□□□□ 0.16
HINT3Q9NQE9 DICER1-AS1-204ENST00000554631 1709 ntTSL 2 BASIC16.06■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 57.5 ms