Protein–RNA interactions for Protein: Q9HBL6

LRTM1, Leucine-rich repeat and transmembrane domain-containing protein 1, humanhuman

Predictions only

Length 345 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRTM1Q9HBL6 TEN1-204ENST00000588202 862 ntTSL 3 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 LINC01023-201ENST00000606054 436 ntBASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 LINC01451-201ENST00000623792 534 ntBASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 MPV17L-201ENST00000287594 5820 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 MAPK11-201ENST00000330651 2431 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 ZBED3-AS1-208ENST00000512001 1668 ntTSL 3 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 KRT8P47-201ENST00000604727 1398 ntBASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 BCAR1-201ENST00000162330 3221 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 ASB6-203ENST00000450050 4535 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.13■□□□□ 0.33
LRTM1Q9HBL6 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 MAP3K6-201ENST00000357582 4136 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 GRAMD1B-214ENST00000635736 2814 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 CDH23-205ENST00000398809 4533 ntTSL 5 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 C8orf33-201ENST00000331434 2677 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 AC012313.1-201ENST00000593393 3059 ntBASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 ZMYM5-203ENST00000382907 1092 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 AL441883.1-201ENST00000566170 1045 ntBASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 SRRM2-AS1-203ENST00000571305 1344 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 NOS3-210ENST00000484524 2537 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 GOSR1-201ENST00000225724 6039 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 GGT2-202ENST00000405188 1845 ntTSL 5 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 MED29-202ENST00000594368 1471 ntTSL 2 BASIC17.12■□□□□ 0.33
LRTM1Q9HBL6 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 TMCO1-207ENST00000580248 1735 ntTSL 2 BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 CROCCP2-202ENST00000412962 2773 ntBASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 ALDH3B1-204ENST00000614849 2280 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 KRT18P48-201ENST00000434763 852 ntBASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 ZNF512B-201ENST00000369888 5919 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 P2RX6-201ENST00000401443 1834 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 SLC39A13-213ENST00000533076 1805 ntTSL 2 BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 AC080080.1-201ENST00000625121 2420 ntBASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 REXO1L11P-201ENST00000620964 1927 ntBASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 CYP11A1-202ENST00000358632 2001 ntTSL 2 BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.11■□□□□ 0.33
LRTM1Q9HBL6 PTGDR-201ENST00000306051 2942 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 CAMK2B-204ENST00000350811 2292 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 AMIGO2-202ENST00000429635 3058 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 LINC00921-202ENST00000573951 2468 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 ELAC2-202ENST00000395962 2924 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 WDR13-201ENST00000218056 2124 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 MIR1224-201ENST00000408193 85 ntBASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 SPDYE15P-201ENST00000424157 909 ntBASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 PTPRF-209ENST00000438120 6377 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 AC026471.3-201ENST00000565137 578 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 SLC39A11-207ENST00000579732 1004 ntTSL 2 BASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 AC004263.2-201ENST00000617183 678 ntBASIC17.1■□□□□ 0.33
LRTM1Q9HBL6 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 57.3 ms