Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 SOX2-OT-203ENST00000466034 926 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 SOX2-OT-212ENST00000491282 882 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 TMEM267-204ENST00000510130 721 ntTSL 3 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC015468.1-201ENST00000523852 874 ntTSL 3 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC011632.1-201ENST00000523860 773 ntTSL 3 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC099520.1-205ENST00000524083 316 ntTSL 3 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 ZNF705CP-201ENST00000530515 889 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC008015.1-201ENST00000555505 465 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC025580.2-205ENST00000559960 552 ntTSL 4 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC087393.1-201ENST00000582896 145 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 CBX3P2-202ENST00000583365 535 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL031985.2-201ENST00000600955 480 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AL117336.2-201ENST00000602435 335 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC004080.4-201ENST00000602610 633 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 UBE2E3-213ENST00000602959 909 ntAPPRIS P1 TSL 5 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC092354.1-201ENST00000606057 376 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC023310.4-201ENST00000613130 650 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 CKLF-CMTM1-206ENST00000616804 678 ntAPPRIS ALT2 TSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 AC072046.2-201ENST00000618366 268 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 IGFBP2-201ENST00000233809 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 TEX9-201ENST00000352903 1433 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 BIN1-202ENST00000316724 2693 ntAPPRIS P4 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 ECEL1P1-201ENST00000373592 1742 ntBASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 NELFCD-213ENST00000602795 2305 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 TTC23L-203ENST00000505624 1353 ntAPPRIS P2 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 TBC1D19-205ENST00000511789 1386 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 DDX47-201ENST00000352940 1698 ntTSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 PON2-218ENST00000633531 1653 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC11.14□□□□□ -0.63
KRTAP3-3Q9BYR6 STK32C-201ENST00000298630 2086 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 KCNQ4-204ENST00000509682 1926 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01285-204ENST00000634601 1947 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 B3GAT3-201ENST00000265471 1641 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 EI24-204ENST00000527235 1625 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC010099.4-201ENST00000424515 1453 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 CDK1-209ENST00000614696 1884 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 ACOT1-201ENST00000311148 1713 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 MSANTD3-207ENST00000622639 1748 ntAPPRIS P1 TSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 HMG20B-202ENST00000333651 1596 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 PAXBP1-201ENST00000290178 2564 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 OTOL1-201ENST00000327928 1434 ntAPPRIS P1 TSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC104454.1-201ENST00000421341 1401 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 PIGX-201ENST00000296333 953 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 ZNF843-201ENST00000315678 2137 ntAPPRIS P2 TSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 IL19-202ENST00000340758 1032 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 CRB3-202ENST00000356762 733 ntAPPRIS P4 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 ALDH1A1-202ENST00000376939 822 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 MT-TR-201ENST00000387439 65 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 C6orf226-201ENST00000408925 552 ntAPPRIS P1 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 PYM1-203ENST00000408946 1226 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC009468.1-201ENST00000412800 437 ntTSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 EEF1A1P40-201ENST00000412883 573 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 SVIL-AS1-202ENST00000414457 1243 ntTSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 SLC9B1P4-201ENST00000421957 1288 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 OR5M12P-201ENST00000423388 929 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 OFD1P13Y-201ENST00000431179 1232 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 TMEM191C-206ENST00000432134 1129 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC007652.1-201ENST00000441150 562 ntTSL 4 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AP000146.1-203ENST00000444178 309 ntTSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 RAD1P2-201ENST00000446414 663 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AL513422.1-201ENST00000449531 383 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 RBM22P5-201ENST00000449536 1277 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC092155.2-201ENST00000454675 477 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC078857.1-201ENST00000469870 667 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 ST13P14-201ENST00000474095 734 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC011825.1-201ENST00000484967 388 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 RHEB-207ENST00000496004 744 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC114954.1-201ENST00000506656 820 ntTSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC090458.1-203ENST00000527757 546 ntTSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 GPRC5D-AS1-205ENST00000540198 404 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 GABRB3-205ENST00000545868 1267 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 DCN-215ENST00000550099 719 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 OTX2-206ENST00000555006 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AL355916.3-201ENST00000556347 779 ntAPPRIS P1 TSL 4 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 ENO1P2-201ENST00000557166 974 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC217774.1-201ENST00000578936 517 ntTSL 4 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC011473.3-201ENST00000594910 485 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC010519.1-201ENST00000599924 344 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 CRB3-204ENST00000600229 1078 ntAPPRIS ALT2 TSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AP000907.4-201ENST00000604143 237 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC073114.1-201ENST00000612027 490 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AL021578.1-201ENST00000613646 709 ntBASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 CLECL1-204ENST00000621400 611 ntAPPRIS ALT2 TSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 LAMTOR5-AS1-246ENST00000630298 858 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC008505.1-205ENST00000637847 703 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 H2AFY2-201ENST00000373255 1980 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 AC027288.3-202ENST00000550268 1820 ntTSL 2 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 MKL1-212ENST00000618417 1842 ntTSL 5 BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 CHADL-201ENST00000216241 2533 ntAPPRIS P1 TSL 1 (best) BASIC11.13□□□□□ -0.63
KRTAP3-3Q9BYR6 GCA-201ENST00000233612 1694 ntTSL 2 BASIC11.13□□□□□ -0.63
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms