Protein–RNA interactions for Protein: Q9BWG4

SSBP4, Single-stranded DNA-binding protein 4, humanhuman

Predicted RBP Predictions only

Length 385 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4Q9BWG4 LYPD5-202ENST00000414615 2137 ntAPPRIS P3 TSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PEPD-203ENST00000436370 1638 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 NPHP3-201ENST00000337331 4362 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 SLITRK4-201ENST00000338017 3357 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 SYBU-209ENST00000446070 2919 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 KMT5C-212ENST00000630497 2037 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 MKNK2-201ENST00000250896 3774 ntAPPRIS P4 TSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 PIGQ-201ENST00000026218 2846 ntTSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 YY1-201ENST00000262238 6697 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
SSBP4Q9BWG4 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ENDOV-225ENST00000522751 1475 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ADARB1-204ENST00000389863 3563 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 AKIP1-207ENST00000529876 1421 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 CORO6-212ENST00000584969 1416 ntAPPRIS ALT1 TSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ARMC5-203ENST00000457010 4844 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 SPINT1-202ENST00000562057 2456 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 C12orf42-208ENST00000548883 1336 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 SYNGR2-206ENST00000589711 2041 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ST6GALNAC6-216ENST00000622357 2396 ntAPPRIS ALT1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 PMEPA1-204ENST00000395814 800 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 AC004980.1-204ENST00000429707 299 ntBASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 LIMD2-206ENST00000578993 602 ntTSL 3 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 TRAPPC3-208ENST00000616074 1114 ntTSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 PCDHA1-201ENST00000378133 2726 ntBASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 NFATC4-210ENST00000554050 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 RDX-201ENST00000343115 4491 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 LINC00554-201ENST00000564841 3011 ntBASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ADRA2A-201ENST00000280155 3745 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 ATP6AP2-214ENST00000636287 1904 ntAPPRIS ALT2 TSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 PHGDH-223ENST00000641597 2585 ntAPPRIS P1 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 SFTPB-202ENST00000409383 1867 ntAPPRIS P2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 RAP2C-201ENST00000342983 3896 ntAPPRIS P1 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 RUFY2-203ENST00000388768 4502 ntTSL 2 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 HNRNPA3-201ENST00000392524 2067 ntAPPRIS P3 TSL 5 BASIC13.48□□□□□ -0.25
SSBP4Q9BWG4 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 CYHR1-204ENST00000438911 2020 ntAPPRIS P1 TSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 PRMT6-201ENST00000370078 2616 ntAPPRIS P1 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 HOXB6-201ENST00000225648 1660 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 MYCL-203ENST00000397332 3256 ntAPPRIS ALT2 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 UXT-201ENST00000333119 574 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 SYNE2-201ENST00000341472 1132 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AGGF1P2-201ENST00000426656 2106 ntBASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AC069152.1-201ENST00000438030 544 ntBASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 ZFPL1-203ENST00000525509 478 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AC098934.4-201ENST00000564127 592 ntBASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AC008403.3-201ENST00000598924 454 ntBASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 MDFIC-202ENST00000393486 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 C7orf31-201ENST00000283905 2673 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 HOXA2-201ENST00000222718 1814 ntAPPRIS P1 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 MYEF2-215ENST00000610570 2591 ntTSL 5 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 AC099343.3-201ENST00000605834 2503 ntBASIC13.47□□□□□ -0.25
SSBP4Q9BWG4 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC13.47□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 24.4 ms