Protein–RNA interactions for Protein: Q99990

VGLL1, Transcription cofactor vestigial-like protein 1, humanhuman

Predictions only

Length 258 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VGLL1Q99990 LINC01063-201ENST00000441644 348 ntTSL 3 BASIC13.52□□□□□ -0.25
VGLL1Q99990 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC13.52□□□□□ -0.25
VGLL1Q99990 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC13.52□□□□□ -0.25
VGLL1Q99990 SLC9A3R2-208ENST00000566198 1199 ntTSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 AP000525.1-201ENST00000608286 694 ntBASIC13.52□□□□□ -0.25
VGLL1Q99990 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC13.52□□□□□ -0.25
VGLL1Q99990 AC116562.4-202ENST00000641738 218 ntBASIC13.52□□□□□ -0.25
VGLL1Q99990 MME-217ENST00000616757 1315 ntTSL 5 BASIC13.52□□□□□ -0.25
VGLL1Q99990 STN1-201ENST00000224950 1417 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 SP7-203ENST00000537210 1472 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC13.52□□□□□ -0.25
VGLL1Q99990 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 CDC42BPG-201ENST00000342711 5742 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 ZIC3-202ENST00000370606 1968 ntTSL 5 BASIC13.52□□□□□ -0.25
VGLL1Q99990 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 PRCC-201ENST00000271526 2105 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 ERLEC1-201ENST00000185150 2433 ntAPPRIS P3 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 TRIM11-202ENST00000366699 2511 ntTSL 2 BASIC13.52□□□□□ -0.25
VGLL1Q99990 AC022211.2-201ENST00000585075 2527 ntBASIC13.52□□□□□ -0.25
VGLL1Q99990 NF2-208ENST00000403435 2568 ntTSL 5 BASIC13.52□□□□□ -0.25
VGLL1Q99990 CCNI2-204ENST00000614847 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 PYCR3-201ENST00000220966 2678 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 VASN-201ENST00000304735 2806 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 STK39-201ENST00000355999 3820 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
VGLL1Q99990 TRAPPC11-201ENST00000334690 4552 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 BMP2K-201ENST00000335016 3804 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
VGLL1Q99990 AGBL5-202ENST00000360131 3177 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 ARID5A-203ENST00000454558 3079 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 CLCN2-204ENST00000434054 2897 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 DNAJA3-202ENST00000355296 2591 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 CSTB-204ENST00000640406 2354 ntTSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 AP001094.4-201ENST00000579008 2176 ntBASIC13.51□□□□□ -0.25
VGLL1Q99990 CCDC112-205ENST00000506442 2145 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 ADAMTS16-201ENST00000274181 4979 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 MLEC-201ENST00000228506 6626 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC13.51□□□□□ -0.25
VGLL1Q99990 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 AC007663.1-201ENST00000438948 1240 ntBASIC13.51□□□□□ -0.25
VGLL1Q99990 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC13.51□□□□□ -0.25
VGLL1Q99990 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC13.51□□□□□ -0.25
VGLL1Q99990 TMEM263-208ENST00000551489 621 ntTSL 4 BASIC13.51□□□□□ -0.25
VGLL1Q99990 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC13.51□□□□□ -0.25
VGLL1Q99990 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 AK4-207ENST00000545314 6887 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 CCDC120-206ENST00000603986 2379 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC13.51□□□□□ -0.25
VGLL1Q99990 BOC-212ENST00000485230 2173 ntTSL 2 BASIC13.51□□□□□ -0.25
VGLL1Q99990 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 PODXL-202ENST00000378555 2105 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
VGLL1Q99990 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 AL139130.1-201ENST00000451362 5586 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 AC133963.1-201ENST00000504166 1679 ntBASIC13.5□□□□□ -0.25
VGLL1Q99990 GRIA4-203ENST00000393127 5621 ntTSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 ORAI2-205ENST00000478730 5531 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 KIAA0368-201ENST00000259335 7391 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 PMS1-213ENST00000441310 3225 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 ACAT2-201ENST00000367048 3180 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 TFAP2E-201ENST00000373235 2189 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 H2AFV-201ENST00000222690 3804 ntAPPRIS ALT1 TSL 2 BASIC13.5□□□□□ -0.25
VGLL1Q99990 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 BAALC-201ENST00000297574 801 ntTSL 3 BASIC13.5□□□□□ -0.25
VGLL1Q99990 RAC1-202ENST00000356142 907 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
VGLL1Q99990 AIF1L-203ENST00000372298 849 ntTSL 3 BASIC13.5□□□□□ -0.25
VGLL1Q99990 AL365259.1-203ENST00000451660 707 ntTSL 3 BASIC13.5□□□□□ -0.25
VGLL1Q99990 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC13.5□□□□□ -0.25
VGLL1Q99990 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 20 ms