Protein–RNA interactions for Protein: Q99835

SMO, Smoothened homolog, humanhuman

Predictions only

Length 787 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMOQ99835 VPS51-217ENST00000639871 243 ntTSL 5 BASIC18.63■□□□□ 0.57
SMOQ99835 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 AC012317.2-201ENST00000623305 2251 ntBASIC18.63■□□□□ 0.57
SMOQ99835 AMZ2-203ENST00000392720 1378 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.63■□□□□ 0.57
SMOQ99835 DPH6-AS1-201ENST00000501169 1477 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC18.63■□□□□ 0.57
SMOQ99835 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.63■□□□□ 0.57
SMOQ99835 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.63■□□□□ 0.57
SMOQ99835 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC18.63■□□□□ 0.57
SMOQ99835 ANKRD6-204ENST00000447838 2968 ntAPPRIS P3 TSL 1 (best) BASIC18.63■□□□□ 0.57
SMOQ99835 LONP1-201ENST00000360614 3236 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC18.62■□□□□ 0.57
SMOQ99835 IL1R1-205ENST00000410023 5143 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 ADORA1-202ENST00000337894 2919 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 FBXO41-204ENST00000520530 3293 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMOQ99835 SRRM3-204ENST00000611745 3612 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
SMOQ99835 VAMP5-201ENST00000306384 689 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 MAL-203ENST00000353004 873 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC18.62■□□□□ 0.57
SMOQ99835 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 DNASE1L2-202ENST00000382437 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 DHRS4-203ENST00000397075 727 ntTSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 AC009078.2-202ENST00000463353 338 ntBASIC18.62■□□□□ 0.57
SMOQ99835 AP002469.2-201ENST00000531724 424 ntBASIC18.62■□□□□ 0.57
SMOQ99835 BLOC1S1-204ENST00000549147 1229 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 AC026336.2-201ENST00000563922 763 ntTSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 ANKMY2-206ENST00000628652 1270 ntTSL 5 BASIC18.62■□□□□ 0.57
SMOQ99835 EVI5L-201ENST00000270530 3855 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 KRT8P10-201ENST00000450021 1447 ntBASIC18.62■□□□□ 0.57
SMOQ99835 CXorf40B-205ENST00000462691 1440 ntAPPRIS ALT1 TSL 3 BASIC18.62■□□□□ 0.57
SMOQ99835 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC18.62■□□□□ 0.57
SMOQ99835 PMPCAP1-201ENST00000508114 1576 ntBASIC18.62■□□□□ 0.57
SMOQ99835 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 BIN1-208ENST00000376113 1832 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC18.62■□□□□ 0.57
SMOQ99835 REXO1L11P-201ENST00000620964 1927 ntBASIC18.62■□□□□ 0.57
SMOQ99835 HGFAC-201ENST00000382774 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
SMOQ99835 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC18.62■□□□□ 0.57
SMOQ99835 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 VPS37B-201ENST00000267202 3028 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 HOXC6-202ENST00000394331 2943 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 ZNF668-202ENST00000394983 2717 ntAPPRIS P1 TSL 5 BASIC18.61■□□□□ 0.57
SMOQ99835 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 ARMC10-209ENST00000454559 2347 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC18.61■□□□□ 0.57
SMOQ99835 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC18.61■□□□□ 0.57
SMOQ99835 SREBF2-209ENST00000612482 5365 ntTSL 5 BASIC18.61■□□□□ 0.57
SMOQ99835 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 RPL13P5-202ENST00000412023 1438 ntTSL 2 BASIC18.61■□□□□ 0.57
SMOQ99835 PAN3-AS1-201ENST00000563843 1351 ntBASIC18.61■□□□□ 0.57
SMOQ99835 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC18.61■□□□□ 0.57
SMOQ99835 RAD52-211ENST00000536177 1139 ntAPPRIS ALT2 TSL 2 BASIC18.61■□□□□ 0.57
SMOQ99835 MTUS2-205ENST00000542829 1165 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.61■□□□□ 0.57
SMOQ99835 CALM3-211ENST00000598871 561 ntTSL 4 BASIC18.61■□□□□ 0.57
SMOQ99835 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.61■□□□□ 0.57
SMOQ99835 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC18.61■□□□□ 0.57
SMOQ99835 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 SYTL3-201ENST00000297239 2292 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
SMOQ99835 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.61■□□□□ 0.57
SMOQ99835 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.6■□□□□ 0.57
SMOQ99835 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC18.6■□□□□ 0.57
SMOQ99835 PRICKLE4-204ENST00000458694 1646 ntAPPRIS P2 TSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 THNSL2-203ENST00000377254 1560 ntTSL 2 BASIC18.6■□□□□ 0.57
SMOQ99835 AL353593.2-201ENST00000602529 1483 ntBASIC18.6■□□□□ 0.57
SMOQ99835 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 FPGS-201ENST00000373225 2278 ntTSL 2 BASIC18.6■□□□□ 0.57
SMOQ99835 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 RNASEH2A-201ENST00000221486 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 RPS12-201ENST00000230050 631 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC18.6■□□□□ 0.57
SMOQ99835 COLEC11-207ENST00000404205 1062 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 SRP19-202ENST00000445150 833 ntTSL 2 BASIC18.6■□□□□ 0.57
SMOQ99835 LAT-205ENST00000454369 1262 ntAPPRIS ALT2 TSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.6■□□□□ 0.57
SMOQ99835 CCNG1-208ENST00000510664 994 ntTSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 AC021066.1-201ENST00000549788 647 ntTSL 3 BASIC18.6■□□□□ 0.57
SMOQ99835 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 AC064853.6-201ENST00000642029 303 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMOQ99835 ARHGAP9-202ENST00000393797 2912 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
SMOQ99835 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.6■□□□□ 0.57
SMOQ99835 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.6■□□□□ 0.57
SMOQ99835 ARSA-204ENST00000395621 1918 ntAPPRIS P1 TSL 2 BASIC18.6■□□□□ 0.57
SMOQ99835 ASB13-201ENST00000357700 2699 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 22.8 ms