Protein–RNA interactions for Protein: Q99743

NPAS2, Neuronal PAS domain-containing protein 2, humanhuman

Predictions only

Length 824 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPAS2Q99743 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPAS2Q99743 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 AC093010.1-201ENST00000473625 1624 ntBASIC17.44■□□□□ 0.38
NPAS2Q99743 KIAA1586-203ENST00000545356 2883 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS2Q99743 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS2Q99743 WIPF2-210ENST00000585043 2693 ntAPPRIS P2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 AZU1-201ENST00000233997 908 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 GGCT-202ENST00000275428 1173 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC17.44■□□□□ 0.38
NPAS2Q99743 KRTAP5-10-201ENST00000398531 1176 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPAS2Q99743 PLCB1-204ENST00000404098 1260 ntTSL 3 BASIC17.44■□□□□ 0.38
NPAS2Q99743 SAPCD2P2-201ENST00000431719 1174 ntBASIC17.44■□□□□ 0.38
NPAS2Q99743 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC17.44■□□□□ 0.38
NPAS2Q99743 REEP1-207ENST00000535845 1196 ntTSL 2 BASIC17.44■□□□□ 0.38
NPAS2Q99743 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC17.44■□□□□ 0.38
NPAS2Q99743 C10orf142-201ENST00000619243 1110 ntAPPRIS P2 TSL 2 BASIC17.44■□□□□ 0.38
NPAS2Q99743 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.44■□□□□ 0.38
NPAS2Q99743 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 NFATC4-215ENST00000554661 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
NPAS2Q99743 SYTL3-203ENST00000367081 2692 ntAPPRIS P3 TSL 5 BASIC17.44■□□□□ 0.38
NPAS2Q99743 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.44■□□□□ 0.38
NPAS2Q99743 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.43■□□□□ 0.38
NPAS2Q99743 BLCAP-201ENST00000373537 2073 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS2Q99743 PLD3-205ENST00000409419 1966 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
NPAS2Q99743 GUCA2B-201ENST00000372581 597 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 AL031133.1-201ENST00000406807 723 ntBASIC17.43■□□□□ 0.38
NPAS2Q99743 MCCD1P1-208ENST00000445732 328 ntBASIC17.43■□□□□ 0.38
NPAS2Q99743 KRT18P38-201ENST00000449496 1282 ntBASIC17.43■□□□□ 0.38
NPAS2Q99743 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS2Q99743 AP006621.4-201ENST00000527021 532 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS2Q99743 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.43■□□□□ 0.38
NPAS2Q99743 GOLGA2P7-203ENST00000557881 896 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS2Q99743 MCRIP1-206ENST00000573478 1123 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS2Q99743 BVES-AS1-203ENST00000580511 853 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS2Q99743 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC17.43■□□□□ 0.38
NPAS2Q99743 GOLGA2P10-205ENST00000618267 983 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 EIF3L-202ENST00000406934 2282 ntTSL 2 BASIC17.43■□□□□ 0.38
NPAS2Q99743 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 FIBCD1-201ENST00000372337 1868 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS2Q99743 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 KLHL21-202ENST00000377663 6445 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.43■□□□□ 0.38
NPAS2Q99743 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 NOTCH3-201ENST00000263388 8666 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC17.43■□□□□ 0.38
NPAS2Q99743 IRF3-203ENST00000377139 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
NPAS2Q99743 TMEM130-202ENST00000345589 2261 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPAS2Q99743 PTGER3-208ENST00000370932 1841 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NPAS2Q99743 HNF1B-202ENST00000614313 1819 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS2Q99743 HNF1B-203ENST00000617272 1820 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 ATP5L-201ENST00000300688 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
NPAS2Q99743 SLC47A1-209ENST00000575023 2224 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 MPG-201ENST00000219431 1193 ntAPPRIS P4 TSL 3 BASIC17.42■□□□□ 0.38
NPAS2Q99743 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
NPAS2Q99743 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 ISCU-203ENST00000431221 799 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS2Q99743 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC17.42■□□□□ 0.38
NPAS2Q99743 LY6E-210ENST00000521182 1079 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 C12orf76-204ENST00000547573 607 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS2Q99743 NUDT16L1-203ENST00000586252 922 ntTSL 3 BASIC17.42■□□□□ 0.38
NPAS2Q99743 AC140113.3-201ENST00000605663 199 ntBASIC17.42■□□□□ 0.38
NPAS2Q99743 AL031432.5-201ENST00000641059 760 ntBASIC17.42■□□□□ 0.38
NPAS2Q99743 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 FAM110A-201ENST00000246100 1619 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 CXXC1-202ENST00000412036 2280 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC17.42■□□□□ 0.38
NPAS2Q99743 CACNA1A-215ENST00000635727 7536 ntAPPRIS ALT2 TSL 5 BASIC17.42■□□□□ 0.38
NPAS2Q99743 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 IRF5-202ENST00000357234 1680 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 ENC1-205ENST00000510316 5381 ntTSL 2 BASIC17.42■□□□□ 0.38
NPAS2Q99743 MDFIC-201ENST00000257724 4598 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
NPAS2Q99743 EXO5-202ENST00000358527 1892 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 DIABLO-204ENST00000413918 1859 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS2Q99743 FRMD4A-203ENST00000357447 6821 ntAPPRIS P2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 LMBR1L-204ENST00000547382 2235 ntTSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 ACVRL1-202ENST00000419526 1356 ntTSL 2 BASIC17.41■□□□□ 0.38
NPAS2Q99743 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 GABRB3-202ENST00000311550 5781 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
NPAS2Q99743 ABLIM2-203ENST00000361737 3396 ntAPPRIS ALT2 TSL 2 BASIC17.41■□□□□ 0.38
NPAS2Q99743 CROCC2-201ENST00000443866 5382 ntAPPRIS P1 TSL 5 BASIC17.41■□□□□ 0.38
NPAS2Q99743 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 36.3 ms