Protein–RNA interactions for Protein: Q99608

NDN, Necdin, humanhuman

Predictions only

Length 321 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NDNQ99608 HMGXB3-201ENST00000502717 4974 ntAPPRIS P2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 PLCB2-202ENST00000456256 4242 ntTSL 1 (best) BASIC17.87■□□□□ 0.45
NDNQ99608 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 TRIM27-201ENST00000377194 2686 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC17.86■□□□□ 0.45
NDNQ99608 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.86■□□□□ 0.45
NDNQ99608 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC17.86■□□□□ 0.45
NDNQ99608 NOL4-211ENST00000589544 2221 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 ARID3A-201ENST00000263620 5941 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 CDC25A-202ENST00000351231 3663 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 ZFP90-203ENST00000563169 2512 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 AC117947.1-201ENST00000427448 529 ntBASIC17.86■□□□□ 0.45
NDNQ99608 TMA7-201ENST00000438607 561 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 AC024563.2-201ENST00000603282 481 ntBASIC17.86■□□□□ 0.45
NDNQ99608 LBX1-AS1-201ENST00000430651 2553 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 MACF1-233ENST00000602421 1423 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 AC073508.3-201ENST00000619697 1419 ntBASIC17.86■□□□□ 0.45
NDNQ99608 SYVN1-201ENST00000294256 3048 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 SDC1-203ENST00000403076 1523 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 KCNQ1-201ENST00000155840 3245 ntAPPRIS P2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.86■□□□□ 0.45
NDNQ99608 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 HOXA-AS3-205ENST00000524304 2063 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 AL355312.1-201ENST00000407115 2176 ntBASIC17.86■□□□□ 0.45
NDNQ99608 RGS11-202ENST00000316163 2376 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 GDPD5-214ENST00000533784 2441 ntTSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC17.86■□□□□ 0.45
NDNQ99608 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC17.86■□□□□ 0.45
NDNQ99608 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 HDAC10-222ENST00000626012 2607 ntTSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 WDR90-215ENST00000549091 5589 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 PFKL-201ENST00000349048 2912 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 GGA1-203ENST00000343632 3159 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 E2F2-201ENST00000361729 5191 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 AC211429.1-201ENST00000415277 523 ntBASIC17.85■□□□□ 0.45
NDNQ99608 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 ST6GALNAC4P1-201ENST00000435385 499 ntBASIC17.85■□□□□ 0.45
NDNQ99608 BX664615.1-201ENST00000443558 458 ntBASIC17.85■□□□□ 0.45
NDNQ99608 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 AC092597.1-201ENST00000487352 616 ntBASIC17.85■□□□□ 0.45
NDNQ99608 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 P4HB-223ENST00000576390 439 ntTSL 4 BASIC17.85■□□□□ 0.45
NDNQ99608 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.85■□□□□ 0.45
NDNQ99608 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC17.85■□□□□ 0.45
NDNQ99608 UQCR11-201ENST00000585671 753 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 ATXN2-227ENST00000616825 4575 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 SMN1-211ENST00000625245 885 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 AC092902.2-222ENST00000626312 568 ntTSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 SMN2-215ENST00000628696 885 ntAPPRIS ALT2 TSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC17.85■□□□□ 0.45
NDNQ99608 AL031432.5-201ENST00000641059 760 ntBASIC17.85■□□□□ 0.45
NDNQ99608 CACNA1A-247ENST00000637769 8648 ntAPPRIS ALT2 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 LZTS3-203ENST00000360342 4055 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 OR6D1P-202ENST00000641007 5290 ntBASIC17.85■□□□□ 0.45
NDNQ99608 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
NDNQ99608 OBSL1-201ENST00000289656 2274 ntTSL 5 BASIC17.84■□□□□ 0.45
NDNQ99608 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NDNQ99608 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC17.84■□□□□ 0.45
NDNQ99608 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
NDNQ99608 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 NOL3-201ENST00000268605 1394 ntAPPRIS P3 TSL 3 BASIC17.84■□□□□ 0.45
NDNQ99608 NOL3-211ENST00000568146 1351 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 CICP6-201ENST00000457191 2729 ntBASIC17.84■□□□□ 0.45
NDNQ99608 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
NDNQ99608 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms