Protein–RNA interactions for Protein: Q96RY5

CRAMP1, Protein cramped-like, humanhuman

Predictions only

Length 1,269 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CRAMP1Q96RY5 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC21.62■■□□□ 1.05
CRAMP1Q96RY5 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 ANAPC11-211ENST00000575195 1361 ntAPPRIS P1 TSL 2 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 THUMPD2-204ENST00000505747 1970 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 SLC6A11-202ENST00000454147 2794 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 KCNJ10-208ENST00000639408 1546 ntTSL 5 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 PKD1L2-209ENST00000531391 1488 ntTSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 ID3-201ENST00000374561 1251 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 NDUFA4L2-201ENST00000393825 1186 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 PNMT-202ENST00000394246 821 ntTSL 2 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 NKIRAS1-204ENST00000416026 795 ntAPPRIS P2 TSL 3 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 AL109827.1-203ENST00000541176 872 ntAPPRIS P5 TSL 2 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 LINC01128-208ENST00000608189 824 ntTSL 5 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 C9orf43-202ENST00000374165 2049 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 WEE1-202ENST00000450114 2799 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 LPAR2-201ENST00000407877 1791 ntAPPRIS P1 TSL 1 (best) BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 GALNT10-202ENST00000377661 3778 ntTSL 5 BASIC21.61■■□□□ 1.05
CRAMP1Q96RY5 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 CBLN2-201ENST00000269503 2945 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 CLN3-203ENST00000357806 1469 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 AC100803.2-201ENST00000562459 1963 ntBASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 PRLH-201ENST00000165524 264 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 ETNK1-202ENST00000335148 1083 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 GPX7-201ENST00000361314 1228 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 AC002558.1-201ENST00000488906 803 ntBASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 AP000892.1-201ENST00000504906 488 ntTSL 3 BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 AC087645.2-201ENST00000586321 799 ntTSL 3 BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 TOM1L2-203ENST00000395739 1766 ntTSL 2 BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 ADRA1A-201ENST00000276393 2281 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 AC025580.3-201ENST00000617932 1424 ntBASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 OGFOD2-212ENST00000538755 1949 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 AC093677.2-201ENST00000600169 1863 ntBASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 SLC6A9-201ENST00000357730 2168 ntTSL 1 (best) BASIC21.6■■□□□ 1.05
CRAMP1Q96RY5 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AC009949.1-201ENST00000623048 1830 ntBASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 BPHL-203ENST00000380379 1928 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 FBRS-202ENST00000356166 5200 ntTSL 5 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 ROPN1L-201ENST00000274134 1066 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 ASIC3-201ENST00000297512 1718 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 GAS6-201ENST00000327773 2490 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 IZUMO4-201ENST00000395296 869 ntTSL 2 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 SNTG2-202ENST00000407292 1436 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 ARPC4-203ENST00000433034 926 ntTSL 3 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 FAM58CP-201ENST00000435741 640 ntBASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AP000344.2-201ENST00000512987 629 ntBASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AC023355.1-201ENST00000560323 752 ntTSL 3 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AC012617.1-203ENST00000590845 439 ntTSL 2 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AC010615.2-202ENST00000597444 832 ntTSL 3 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AGAP4-207ENST00000616763 2784 ntAPPRIS ALT2 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 HIST1H2AK-201ENST00000618958 393 ntAPPRIS P1 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 AC007064.4-201ENST00000637740 555 ntBASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 SPNS2-201ENST00000329078 3447 ntAPPRIS P1 TSL 1 (best) BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 DEPTOR-203ENST00000523492 1397 ntTSL 2 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 SALRNA1-201ENST00000555871 2086 ntTSL 4 BASIC21.59■■□□□ 1.05
CRAMP1Q96RY5 PCBP3-205ENST00000400310 2168 ntTSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 TADA3-202ENST00000343450 2554 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 CHAC1-204ENST00000617768 1560 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 PCCB-209ENST00000469217 1841 ntAPPRIS ALT2 TSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 ARHGEF7-202ENST00000317133 4361 ntAPPRIS ALT2 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 NMRK2-201ENST00000168977 1126 ntAPPRIS P3 TSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 C9orf116-202ENST00000371789 1278 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 RNASE10-202ENST00000430083 1172 ntTSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 IRF3-204ENST00000442265 315 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 OST4-202ENST00000447619 458 ntAPPRIS P1 TSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 AC002398.2-201ENST00000587767 660 ntTSL 5 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 AC023141.13-201ENST00000604991 943 ntBASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 SLC9A3-AS1-204ENST00000606288 791 ntTSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 SLC9A3-AS1-205ENST00000606319 477 ntTSL 3 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 MAGIX-204ENST00000614074 778 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 NMRK2-205ENST00000616156 1139 ntAPPRIS ALT2 TSL 5 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 CITED2-204ENST00000618718 901 ntTSL 2 BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC21.58■■□□□ 1.05
CRAMP1Q96RY5 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC21.58■■□□□ 1.04
CRAMP1Q96RY5 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.58■■□□□ 1.04
Retrieved 100 of 98,524 protein–RNA pairs in 45.7 ms