Protein–RNA interactions for Protein: Q96RR1

TWNK, Twinkle protein, mitochondrial, humanhuman

Predictions only

Length 684 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TWNKQ96RR1 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 CD151-203ENST00000397421 1486 ntAPPRIS P2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 YDJC-201ENST00000292778 1351 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 HARS-201ENST00000307633 1780 ntTSL 2 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 C2orf27B-201ENST00000623129 1325 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 ASGR1-202ENST00000380920 944 ntTSL 3 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 FAM220CP-201ENST00000395253 831 ntBASIC18.84■□□□□ 0.61
TWNKQ96RR1 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 C19orf25-210ENST00000591027 574 ntTSL 4 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 KCNQ5-202ENST00000355194 6566 ntAPPRIS ALT1 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 KCNQ5-206ENST00000402622 6596 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 FAM110D-201ENST00000374268 2858 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 TLE3-201ENST00000317509 5207 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 DDX42-202ENST00000389924 3939 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 SUPT20H-202ENST00000356185 2681 ntAPPRIS P3 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 BX276092.7-203ENST00000637198 1536 ntBASIC18.84■□□□□ 0.61
TWNKQ96RR1 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 TFCP2-204ENST00000548115 1862 ntTSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
TWNKQ96RR1 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 DNAJC28-203ENST00000402202 1480 ntAPPRIS P1 TSL 5 BASIC18.84■□□□□ 0.61
TWNKQ96RR1 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TWNKQ96RR1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.83■□□□□ 0.61
TWNKQ96RR1 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.83■□□□□ 0.61
TWNKQ96RR1 AC005332.8-201ENST00000622750 2735 ntBASIC18.83■□□□□ 0.61
TWNKQ96RR1 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.61
TWNKQ96RR1 ADAM33-203ENST00000379861 3674 ntAPPRIS ALT2 TSL 1 (best) BASIC18.83■□□□□ 0.61
TWNKQ96RR1 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.61
TWNKQ96RR1 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 TMEM213-202ENST00000413208 480 ntAPPRIS ALT2 TSL 3 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 METTL21A-205ENST00000426075 1051 ntAPPRIS P1 TSL 2 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 AC019129.2-201ENST00000609837 1235 ntBASIC18.83■□□□□ 0.6
TWNKQ96RR1 LINC00304-203ENST00000565008 1864 ntBASIC18.83■□□□□ 0.6
TWNKQ96RR1 SENP6-202ENST00000370010 4644 ntAPPRIS P3 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 ST8SIA5-201ENST00000315087 2716 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC18.83■□□□□ 0.6
TWNKQ96RR1 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC18.83■□□□□ 0.6
TWNKQ96RR1 OBSL1-204ENST00000404537 5841 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 LMNA-208ENST00000448611 1943 ntTSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 SIGIRR-201ENST00000332725 1639 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 CDH22-203ENST00000537909 3902 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 KRTAP5-11-201ENST00000398530 1021 ntAPPRIS P2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 THAP5-204ENST00000438865 868 ntTSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 NCBP2-AS1-201ENST00000447775 562 ntTSL 5 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 ICAM2-203ENST00000449662 1221 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 KRT16P4-201ENST00000453883 522 ntBASIC18.82■□□□□ 0.6
TWNKQ96RR1 AC122714.2-201ENST00000502787 707 ntBASIC18.82■□□□□ 0.6
TWNKQ96RR1 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 NPM2-204ENST00000518119 1190 ntAPPRIS P2 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 ANKRD34C-AS1-205ENST00000560452 576 ntTSL 4 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 AC091304.2-201ENST00000564639 760 ntBASIC18.82■□□□□ 0.6
TWNKQ96RR1 IFNL4P1-201ENST00000607083 540 ntBASIC18.82■□□□□ 0.6
TWNKQ96RR1 AL121772.3-201ENST00000610840 674 ntBASIC18.82■□□□□ 0.6
TWNKQ96RR1 AC005632.4-201ENST00000613759 431 ntTSL 3 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 AL732314.6-201ENST00000627721 484 ntTSL 4 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 ISLR2-210ENST00000565540 2780 ntAPPRIS P1 TSL 4 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 NR2C2-206ENST00000425241 2494 ntAPPRIS P1 TSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 LPAR3-201ENST00000370611 1720 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 APOA4-201ENST00000357780 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 MIOX-202ENST00000395732 1658 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 ZCCHC24-202ENST00000372336 4933 ntAPPRIS P1 TSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 KDM2A-202ENST00000398645 6511 ntTSL 1 (best) BASIC18.82■□□□□ 0.6
TWNKQ96RR1 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.82■□□□□ 0.6
TWNKQ96RR1 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC18.81■□□□□ 0.6
TWNKQ96RR1 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC18.81■□□□□ 0.6
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms