Protein–RNA interactions for Protein: Q96RK4

BBS4, Bardet-Biedl syndrome 4 protein, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4Q96RK4 ELAVL1-202ENST00000593807 856 ntTSL 3 BASIC16.9■□□□□ 0.3
BBS4Q96RK4 AC009154.2-201ENST00000621177 724 ntBASIC16.9■□□□□ 0.3
BBS4Q96RK4 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BBS4Q96RK4 RPS6KA5-201ENST00000418736 2249 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
BBS4Q96RK4 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC16.9■□□□□ 0.3
BBS4Q96RK4 DVL2-209ENST00000575458 2659 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
BBS4Q96RK4 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BBS4Q96RK4 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BBS4Q96RK4 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
BBS4Q96RK4 CACNA1H-206ENST00000565831 7815 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
BBS4Q96RK4 PPP3CA-201ENST00000323055 4519 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BBS4Q96RK4 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.89■□□□□ 0.3
BBS4Q96RK4 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC16.89■□□□□ 0.3
BBS4Q96RK4 KDM6A-211ENST00000536777 5633 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 SYT6-205ENST00000609117 4424 ntTSL 5 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 LINC01979-201ENST00000576738 5271 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 LRRC3-201ENST00000291592 5869 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 KRT18P21-201ENST00000515767 1272 ntBASIC16.89■□□□□ 0.29
BBS4Q96RK4 VENTXP5-201ENST00000523979 775 ntBASIC16.89■□□□□ 0.29
BBS4Q96RK4 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 GPR32P1-201ENST00000601788 811 ntBASIC16.89■□□□□ 0.29
BBS4Q96RK4 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.89■□□□□ 0.29
BBS4Q96RK4 HYMAI.1-201ENST00000620949 238 ntBASIC16.89■□□□□ 0.29
BBS4Q96RK4 AL772307.1-201ENST00000639363 1066 ntTSL 2 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 PLD3-206ENST00000409587 2180 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC16.89■□□□□ 0.29
BBS4Q96RK4 HS2ST1-202ENST00000370551 1585 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
BBS4Q96RK4 AL353692.3-201ENST00000407031 1396 ntBASIC16.89■□□□□ 0.29
BBS4Q96RK4 SATB2-203ENST00000428695 2135 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 IL18BP-207ENST00000404792 2172 ntAPPRIS P2 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 CACNA1A-238ENST00000637276 7135 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 AL109910.2-201ENST00000607733 1953 ntTSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 NEU1-206ENST00000375631 2045 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 BEX3-204ENST00000372645 913 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 AL671277.2-201ENST00000458060 996 ntBASIC16.88■□□□□ 0.29
BBS4Q96RK4 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 MAP3K14-AS1-202ENST00000585351 893 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 AC243829.1-201ENST00000615128 1059 ntTSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 DFFB-212ENST00000625756 649 ntTSL 5 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 ZNF324-203ENST00000536459 5653 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 SBNO2-204ENST00000587024 4861 ntAPPRIS ALT2 TSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
BBS4Q96RK4 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
BBS4Q96RK4 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 ZNF22-201ENST00000298299 2551 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 MAGEA3-203ENST00000598245 1762 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 MAGEA6-204ENST00000616035 1762 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 CNST-202ENST00000366512 2422 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 LINC00896-202ENST00000609602 2128 ntBASIC16.87■□□□□ 0.29
BBS4Q96RK4 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 PCDHA13-202ENST00000409494 4884 ntTSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 AC093901.1-201ENST00000414886 778 ntTSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 LCN10-205ENST00000497771 723 ntAPPRIS P2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 TMEM218-206ENST00000527766 812 ntAPPRIS P1 TSL 3 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 HCK-210ENST00000629881 1969 ntAPPRIS ALT2 TSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 ZNF500-202ENST00000545009 2440 ntTSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 ARHGEF40-201ENST00000298694 5919 ntAPPRIS P1 TSL 2 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 PIEZO1-201ENST00000301015 8072 ntAPPRIS P1 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 LARP4B-211ENST00000612396 8546 ntAPPRIS P1 TSL 5 BASIC16.87■□□□□ 0.29
BBS4Q96RK4 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.87■□□□□ 0.29
BBS4Q96RK4 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC16.87■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 38.8 ms