Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF48Q96MX3 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF48Q96MX3 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC14.47□□□□□ -0.09
ZNF48Q96MX3 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 RHOU-201ENST00000366691 4372 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 ROMO1-203ENST00000374077 422 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 UPK3A-202ENST00000396082 627 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AC064807.1-202ENST00000423716 936 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 RBSN-204ENST00000449050 903 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 SCARNA2-201ENST00000458748 420 ntBASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AC008429.1-203ENST00000518894 548 ntTSL 4 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 RPL18-208ENST00000549920 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 RPL18-209ENST00000550645 463 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 RPL18-214ENST00000552588 559 ntTSL 3 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AC139887.3-201ENST00000568585 713 ntBASIC14.46□□□□□ -0.09
ZNF48Q96MX3 LITAF-211ENST00000572255 516 ntTSL 4 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 AC010632.1-201ENST00000590376 572 ntTSL 4 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 CIRBP-235ENST00000591935 746 ntAPPRIS ALT1 TSL 3 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 LINC01607-201ENST00000607172 621 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 PRKN-208ENST00000610470 531 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 PRKN-209ENST00000612485 225 ntTSL 5 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 ASAH1-255ENST00000637638 699 ntTSL 2 BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 FASTK-202ENST00000353841 1402 ntTSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 ABHD11-205ENST00000437775 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 C11orf24-201ENST00000304271 2063 ntAPPRIS P3 TSL 1 (best) BASIC14.46□□□□□ -0.09
ZNF48Q96MX3 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 MALT1-202ENST00000348428 9368 ntAPPRIS P4 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 ZADH2-201ENST00000322342 7732 ntAPPRIS P1 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 SLC34A2-202ENST00000503434 2174 ntAPPRIS ALT2 TSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 PHF12-201ENST00000268756 2957 ntTSL 1 (best) BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 MAN1A1-201ENST00000368468 5014 ntAPPRIS P1 TSL 2 BASIC14.46□□□□□ -0.1
ZNF48Q96MX3 PCCB-207ENST00000466072 1844 ntAPPRIS ALT2 TSL 3 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 ARHGEF28-204ENST00000437974 5792 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 XYLT2-203ENST00000507602 2107 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 EHMT1-204ENST00000462484 2707 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 FAM157B-201ENST00000446912 1795 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 SPNS1-204ENST00000352260 1948 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 CTNNBL1-204ENST00000405275 2076 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 PSTK-201ENST00000368887 1705 ntAPPRIS P2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC112698.1-201ENST00000510299 916 ntBASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC097372.2-201ENST00000510996 732 ntTSL 3 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 SART3-203ENST00000546611 1184 ntBASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC021087.4-201ENST00000563761 564 ntBASIC14.45□□□□□ -0.1
ZNF48Q96MX3 SPINT1-AS1-203ENST00000565315 629 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC106730.1-201ENST00000566722 1090 ntBASIC14.45□□□□□ -0.1
ZNF48Q96MX3 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AP005117.1-201ENST00000584346 1413 ntBASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AL121832.1-201ENST00000615180 677 ntTSL 3 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 CHST13-202ENST00000615522 1146 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 CFC1B-203ENST00000620207 1444 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 EMC8-201ENST00000253457 1962 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 MBD1-208ENST00000398493 1845 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 TRPM2-202ENST00000300482 5989 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 MATN4-203ENST00000372754 2200 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 GTF2IRD2-207ENST00000625377 1910 ntTSL 5 BASIC14.45□□□□□ -0.1
ZNF48Q96MX3 POLR3E-209ENST00000564209 2464 ntTSL 2 BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 WDR18-204ENST00000587001 1465 ntTSL 5 BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 AC090340.1-201ENST00000620778 4980 ntBASIC14.44□□□□□ -0.1
ZNF48Q96MX3 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 DKK3-202ENST00000396505 2650 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
ZNF48Q96MX3 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms