Protein–RNA interactions for Protein: Q96M42

LINC00479, Putative uncharacterized protein encoded by LINC00479, humanhuman

Predictions only

Length 142 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00479Q96M42 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 AC003002.1-202ENST00000596755 1743 ntAPPRIS P1 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 NSFL1C-202ENST00000353088 2611 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 AC004890.2-202ENST00000463462 1494 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 UCHL5-206ENST00000367455 5327 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 CDKN1A-204ENST00000448526 2104 ntAPPRIS P1 TSL 3 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 DMPK-204ENST00000447742 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 PTHLH-201ENST00000201015 1872 ntAPPRIS P3 TSL 3 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 TMEM175-201ENST00000264771 1860 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 TXNDC11-202ENST00000356957 3178 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 HLA-J-201ENST00000462773 1622 ntBASIC13.61□□□□□ -0.23
LINC00479Q96M42 AQP10-203ENST00000484864 2262 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 DYDC2-202ENST00000372197 2022 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 DNAAF2-202ENST00000406043 2819 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 MFF-202ENST00000337110 1760 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 LINC00905-202ENST00000588117 1768 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 SLC3A2-201ENST00000338663 1904 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 PHF1-202ENST00000374516 2330 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 LIN54-204ENST00000505397 2742 ntAPPRIS P1 TSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 LINC02199-201ENST00000506655 2702 ntBASIC13.61□□□□□ -0.23
LINC00479Q96M42 VAV2-202ENST00000371851 5101 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 BAIAP2L2-201ENST00000332536 2065 ntAPPRIS ALT2 TSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 SERINC2-205ENST00000536384 2062 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 AC092666.2-201ENST00000613287 246 ntBASIC13.61□□□□□ -0.23
LINC00479Q96M42 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 DENR-201ENST00000280557 2769 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 CXorf38-202ENST00000378421 2380 ntTSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 FBXO21-201ENST00000330622 2906 ntAPPRIS P3 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 C4orf50-202ENST00000531445 6860 ntAPPRIS P5 TSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 UGCG-201ENST00000374279 4007 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 CNGA3-205ENST00000436404 2504 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 TTC3-203ENST00000399010 2115 ntTSL 5 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 TSKU-205ENST00000612930 2666 ntAPPRIS P1 TSL 4 BASIC13.61□□□□□ -0.23
LINC00479Q96M42 AP3D1-202ENST00000355272 5034 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 BCAT2-208ENST00000598162 1329 ntTSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC13.61□□□□□ -0.23
LINC00479Q96M42 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 CNPPD1-201ENST00000360507 2060 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 DNAAF1-201ENST00000378553 2379 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 TOM1-204ENST00000411850 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 IGF2-205ENST00000416167 5585 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 CASK-203ENST00000378163 4411 ntAPPRIS ALT1 TSL 5 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 CDX4-201ENST00000373514 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 SLC27A1-201ENST00000252595 3594 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 PIGX-202ENST00000392391 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 MESTP1-201ENST00000404287 994 ntBASIC13.6□□□□□ -0.23
LINC00479Q96M42 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 WDR6-202ENST00000415265 1883 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 TMEM240-202ENST00000425828 717 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 KRT18P23-201ENST00000435622 1283 ntBASIC13.6□□□□□ -0.23
LINC00479Q96M42 AC060834.1-201ENST00000443027 2032 ntBASIC13.6□□□□□ -0.23
LINC00479Q96M42 IDH1-AS1-202ENST00000448588 489 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 BNIP3L-206ENST00000523515 915 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ZNF580-203ENST00000545125 1025 ntAPPRIS P1 TSL 3 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 STAC3-202ENST00000546246 1014 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 KLF13-207ENST00000560473 489 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 MIR4674-201ENST00000582457 87 ntBASIC13.6□□□□□ -0.23
LINC00479Q96M42 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 CD177-202ENST00000607855 536 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 PRKAR2B-201ENST00000265717 3745 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 SARS2-201ENST00000221431 2057 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 BRSK1-202ENST00000326848 2095 ntTSL 5 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 STIM2-203ENST00000467011 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
LINC00479Q96M42 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC13.6□□□□□ -0.23
LINC00479Q96M42 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 DOC2GP-204ENST00000639052 2548 ntBASIC13.59□□□□□ -0.23
LINC00479Q96M42 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
LINC00479Q96M42 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 KHNYN-202ENST00000553935 3359 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
LINC00479Q96M42 CDK19-202ENST00000368911 6246 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Retrieved 100 of 98,524 protein–RNA pairs in 26.4 ms