Protein–RNA interactions for Protein: Q96L96

ALPK3, Alpha-protein kinase 3, humanhuman

Predictions only

Length 1,907 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALPK3Q96L96 NUBP2-208ENST00000565987 1049 ntTSL 5 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 ACAP1-208ENST00000574499 412 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 IFT20-216ENST00000588477 774 ntTSL 5 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 AC108010.1-201ENST00000605862 1107 ntTSL 5 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 TMPRSS12-201ENST00000398458 1450 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 AC093010.1-201ENST00000473625 1624 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 KHNYN-206ENST00000556842 2443 ntAPPRIS P1 TSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 MTERF2-202ENST00000392830 1763 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 CD81-202ENST00000381036 880 ntTSL 3 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 LINC01818-201ENST00000437118 368 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 AC140658.5-201ENST00000438532 169 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 DNAJC19-208ENST00000486355 828 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 DNAJC19-209ENST00000491873 769 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 SERBP1P5-201ENST00000510079 1181 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 STK19B-204ENST00000512515 211 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 SERF1A-207ENST00000512649 846 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 RPL28-209ENST00000560055 670 ntTSL 3 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 AL596325.1-201ENST00000563991 1082 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 GNAO1-210ENST00000569295 930 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 AC109462.3-201ENST00000573934 613 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 ACTL9-202ENST00000612068 1252 ntBASIC19.21■□□□□ 0.67
ALPK3Q96L96 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 CFC1B-202ENST00000619050 1554 ntTSL 5 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC19.21■□□□□ 0.67
ALPK3Q96L96 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 NFIL3-201ENST00000297689 2085 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.67
ALPK3Q96L96 RNF183-203ENST00000441031 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.21■□□□□ 0.66
ALPK3Q96L96 MAP4K1-203ENST00000586296 1363 ntTSL 5 BASIC19.21■□□□□ 0.66
ALPK3Q96L96 TAF15-215ENST00000605844 2191 ntAPPRIS P3 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 EIF4A1-203ENST00000577269 1319 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 CMTM4-201ENST00000330687 3414 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 DOC2A-208ENST00000564944 1782 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 RPL30-202ENST00000396070 440 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 AC245100.3-201ENST00000441281 285 ntBASIC19.2■□□□□ 0.66
ALPK3Q96L96 APBB2-208ENST00000504305 1274 ntTSL 5 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 GATB-205ENST00000508611 605 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 AF131215.3-201ENST00000532453 639 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 TSFM-210ENST00000550559 897 ntTSL 5 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 MRPL52-208ENST00000553711 586 ntTSL 3 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 THTPA-204ENST00000554970 569 ntTSL 4 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 THTPA-206ENST00000556015 535 ntTSL 3 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 ESPNP-201ENST00000270691 2015 ntBASIC19.2■□□□□ 0.66
ALPK3Q96L96 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 AL445238.1-203ENST00000606050 1525 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 CLEC18A-202ENST00000393701 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 CLEC18C-203ENST00000541793 1955 ntAPPRIS P2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 SHCBP1L-201ENST00000367547 2317 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 YY1AP1-213ENST00000405763 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.2■□□□□ 0.66
ALPK3Q96L96 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC19.2■□□□□ 0.66
ALPK3Q96L96 C12orf10-201ENST00000267103 1192 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AL592309.1-201ENST00000443127 649 ntBASIC19.19■□□□□ 0.66
ALPK3Q96L96 HEBP2-202ENST00000448741 661 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 ITGB1BP1-205ENST00000456913 1043 ntTSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC087163.2-201ENST00000457299 853 ntBASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC002310.2-201ENST00000486926 950 ntTSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 ITGB1BP1-216ENST00000488451 874 ntTSL 3 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 HDDC2-203ENST00000608284 538 ntTSL 3 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 CCNA1-202ENST00000440264 1758 ntAPPRIS P1 TSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 POU4F1-201ENST00000377208 4547 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 CLN6-202ENST00000538696 1343 ntTSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 POLD2-201ENST00000223361 1597 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC016065.1-201ENST00000500118 2413 ntTSL 2 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 ZDHHC20-IT1-201ENST00000417513 440 ntTSL 3 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 ST7-OT4-203ENST00000466018 894 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 PSEN2-206ENST00000472139 1163 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC19.19■□□□□ 0.66
ALPK3Q96L96 TSC22D3-213ENST00000506081 956 ntTSL 5 BASIC19.19■□□□□ 0.66
ALPK3Q96L96 AC069120.2-201ENST00000524091 540 ntBASIC19.19■□□□□ 0.66
Retrieved 100 of 98,524 protein–RNA pairs in 55.5 ms