Protein–RNA interactions for Protein: Q96KN7

RPGRIP1, X-linked retinitis pigmentosa GTPase regulator-interacting protein 1, humanhuman

Predictions only

Length 1,286 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPGRIP1Q96KN7 AC117500.6-201ENST00000624871 588 ntBASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 BNIP2-213ENST00000612191 2515 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RPGRIP1Q96KN7 DAG1-220ENST00000539901 5665 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 FBXO41-205ENST00000521871 7336 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 MTMR14-203ENST00000353332 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 LINC02028-204ENST00000449350 1419 ntTSL 3 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 SIRT1-201ENST00000212015 4094 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 KIF21B-203ENST00000422435 5519 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 RPP21-221ENST00000428040 594 ntTSL 2 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 RPP21-224ENST00000442966 525 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 SEC1P-202ENST00000473944 940 ntBASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 AL356056.2-201ENST00000506914 669 ntTSL 4 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 BX640515.1-201ENST00000617215 977 ntBASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 AL645608.8-201ENST00000606034 2086 ntBASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 EDA-203ENST00000374552 5278 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 GJA3-201ENST00000241125 5211 ntAPPRIS P1 TSL 3 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 NRXN1-220ENST00000611589 1857 ntTSL 5 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RPGRIP1Q96KN7 SRP9-203ENST00000366839 1596 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 PGM5-202ENST00000396396 3338 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 NECTIN3-206ENST00000485303 3664 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 SLC39A1-211ENST00000621013 2322 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 FUOM-201ENST00000278025 709 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 HDDC3-201ENST00000330334 1047 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 AL049795.1-201ENST00000373604 642 ntTSL 3 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 AL023284.2-201ENST00000405850 579 ntBASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 NICN1-204ENST00000436744 1271 ntTSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 SLC2A1-204ENST00000460369 541 ntTSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 AC074051.2-201ENST00000565115 352 ntBASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 AL353801.3-201ENST00000609898 542 ntBASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 AP2M1-201ENST00000292807 1931 ntAPPRIS P4 TSL 5 BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 DIO3OS-212ENST00000557661 1937 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RPGRIP1Q96KN7 NAT9-201ENST00000357814 1875 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 TAPBP-233ENST00000426633 1888 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 TNFAIP3-207ENST00000614035 1430 ntTSL 5 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 FAM110A-203ENST00000381939 1737 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 RNH1-205ENST00000397615 2014 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 ACOXL-205ENST00000439055 2373 ntTSL 2 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 KRTAP5-6-201ENST00000382160 561 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 SAXO2-206ENST00000566205 340 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 AL162497.1-201ENST00000615635 518 ntTSL 4 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 NME4-212ENST00000621774 904 ntTSL 3 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 AF228730.7-201ENST00000641842 219 ntBASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 AC012313.1-201ENST00000593393 3059 ntBASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 NDN-201ENST00000331837 1931 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 ZDHHC4-205ENST00000396713 1552 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 TNIP1-211ENST00000521591 2274 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 AVPR1B-201ENST00000367126 2237 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 APCDD1-201ENST00000355285 3809 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 AP5S1-203ENST00000379573 1848 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 RPRM-201ENST00000325926 1471 ntAPPRIS P1 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 RGS14-201ENST00000408923 2415 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 HTATSF1-204ENST00000535601 3019 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RPGRIP1Q96KN7 LINC00167-201ENST00000530583 1419 ntBASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 AC008556.1-201ENST00000610908 2040 ntBASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 SCARB2-201ENST00000264896 4792 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 ZNF420-201ENST00000304239 1945 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 BRPF1-203ENST00000424362 4712 ntAPPRIS ALT1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 MRPL43-208ENST00000370242 884 ntTSL 2 BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 SQSTM1-202ENST00000389805 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RPGRIP1Q96KN7 C7orf34-201ENST00000409607 766 ntAPPRIS P2 TSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 55.8 ms