Protein–RNA interactions for Protein: Q96FL8

SLC47A1, Multidrug and toxin extrusion protein 1, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC47A1Q96FL8 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 MIR4497-201ENST00000583208 89 ntBASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 CR769767.2-201ENST00000622735 460 ntBASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 GLDC-219ENST00000640208 420 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 SEMA5B-202ENST00000357599 4792 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 SLC52A1-201ENST00000254853 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 LINC00304-203ENST00000565008 1864 ntBASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC16.8■□□□□ 0.28
SLC47A1Q96FL8 KIF16B-203ENST00000408042 4640 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 TMEM132E-201ENST00000321639 5631 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 FAM174B-201ENST00000327355 2792 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 MIS18BP1-212ENST00000627697 1950 ntTSL 5 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 AC007663.1-201ENST00000438948 1240 ntBASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 SLC39A13-212ENST00000531974 856 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 RAB11B-AS1-201ENST00000593581 1013 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 AC010653.2-201ENST00000623505 997 ntBASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 MATN3-201ENST00000407540 2524 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 MYBPH-201ENST00000255416 1805 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 AC133561.2-201ENST00000380145 1802 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 ASB1-201ENST00000264607 6994 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 GUCY1B3-206ENST00000507146 2709 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 SH2D3C-205ENST00000420366 2682 ntTSL 2 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 AC011270.2-201ENST00000624293 2550 ntBASIC16.79■□□□□ 0.28
SLC47A1Q96FL8 CNTNAP3-201ENST00000297668 5064 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 DPF2-205ENST00000528416 2799 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ATP1B1-201ENST00000367815 1883 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 SCAMP4-201ENST00000316097 2684 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 CEP120-201ENST00000306467 4900 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 TLE2-217ENST00000590536 2344 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 TSPY14P-201ENST00000303979 915 ntBASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 TMEM185A-204ENST00000507237 903 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 EGLN1P1-201ENST00000531623 762 ntBASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ORAOV1-206ENST00000536870 2274 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 SLC8B1-210ENST00000550047 2493 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 RAPGEFL1-212ENST00000620260 3855 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 RGMB-AS1-201ENST00000498871 1903 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 TRA2A-212ENST00000621813 1931 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 AC132938.6-201ENST00000623828 1655 ntBASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ZNF133-206ENST00000402618 2622 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 TSNARE1-204ENST00000519651 2110 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 ADGRB2-206ENST00000398556 4879 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 MEG3-205ENST00000412736 1615 ntTSL 2 BASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 HLA-J-201ENST00000462773 1622 ntBASIC16.78■□□□□ 0.28
SLC47A1Q96FL8 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 SERPINB6-208ENST00000616722 2047 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 HECTD2-204ENST00000446394 4939 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 MTDH-201ENST00000336273 6177 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 SYVN1-203ENST00000377190 3052 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 GXYLT1P6-201ENST00000456472 1187 ntBASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 AC128688.1-201ENST00000487626 519 ntBASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 LINC02256-201ENST00000561999 366 ntTSL 3 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 SUSD3-205ENST00000617293 1076 ntAPPRIS ALT2 TSL 3 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 EIF4H-202ENST00000353999 2503 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 SOCS2-AS1-202ENST00000500986 1655 ntTSL 2 BASIC16.77■□□□□ 0.28
SLC47A1Q96FL8 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms