Protein–RNA interactions for Protein: Q96B26

EXOSC8, Exosome complex component RRP43, humanhuman

Known RBP Predictions only

Length 276 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC8Q96B26 RPRD1A-201ENST00000357384 1850 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 AC117500.2-201ENST00000508145 1561 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 SLC1A4-201ENST00000234256 4561 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 ZNF414-201ENST00000255616 1178 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 DNAJC4-201ENST00000321460 1015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 BEX1-201ENST00000372728 864 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 AC092159.3-201ENST00000439196 571 ntTSL 4 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 NOL7-202ENST00000451315 1184 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 LBX1-AS1-203ENST00000454527 740 ntTSL 5 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 LY6E-213ENST00000522528 606 ntTSL 3 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 ISCU-208ENST00000539593 1071 ntTSL 2 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 NAA38-203ENST00000575071 553 ntTSL 2 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 AC005332.3-201ENST00000589904 676 ntBASIC16.91■□□□□ 0.3
EXOSC8Q96B26 AC009154.2-201ENST00000621177 724 ntBASIC16.91■□□□□ 0.3
EXOSC8Q96B26 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 APP-202ENST00000348990 3355 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 MARCH1-203ENST00000503008 5877 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 SGCB-201ENST00000381431 4431 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 RAB39A-201ENST00000320578 1830 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 L1CAM-203ENST00000370055 4655 ntTSL 5 BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 DVL2-201ENST00000005340 3018 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
EXOSC8Q96B26 NOMO1-208ENST00000620755 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 TMEM214-201ENST00000238788 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 ERMARD-210ENST00000588451 2146 ntTSL 5 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 CACNA1A-214ENST00000614285 8410 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 ZFP91-201ENST00000316059 5220 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 CLN3-202ENST00000355477 1173 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 SPDYE13P-201ENST00000445314 798 ntBASIC16.9■□□□□ 0.3
EXOSC8Q96B26 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 CLN6-204ENST00000564752 900 ntTSL 3 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 RNF126P1-202ENST00000569893 925 ntBASIC16.9■□□□□ 0.3
EXOSC8Q96B26 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 CLN6-214ENST00000636314 442 ntTSL 3 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 AC009949.1-201ENST00000623048 1830 ntBASIC16.9■□□□□ 0.3
EXOSC8Q96B26 UNC13A-206ENST00000552293 5314 ntAPPRIS ALT2 TSL 5 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 LINC00957-202ENST00000441052 2590 ntTSL 2 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 MED25-212ENST00000618715 1467 ntTSL 5 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 IFFO1-201ENST00000336604 2686 ntAPPRIS P3 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 YY1AP1-206ENST00000359205 2690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 EML3-212ENST00000494176 2901 ntTSL 2 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.9■□□□□ 0.3
EXOSC8Q96B26 KRT8P47-201ENST00000604727 1398 ntBASIC16.89■□□□□ 0.3
EXOSC8Q96B26 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.89■□□□□ 0.3
EXOSC8Q96B26 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 Z83836.1-201ENST00000624605 1642 ntBASIC16.89■□□□□ 0.29
EXOSC8Q96B26 ELP5-204ENST00000396628 1423 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 SOCS3-201ENST00000330871 2734 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 EMILIN3-201ENST00000332312 3796 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 IGLL1-201ENST00000249053 716 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 BECN2-201ENST00000419583 1296 ntAPPRIS P1 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 AC127526.4-201ENST00000527970 983 ntTSL 3 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 AC116407.2-201ENST00000613639 860 ntBASIC16.89■□□□□ 0.29
EXOSC8Q96B26 mascRNA-menRNA.2-201ENST00000616984 58 ntBASIC16.89■□□□□ 0.29
EXOSC8Q96B26 MARK4-210ENST00000620044 2105 ntTSL 5 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 ZCWPW1-202ENST00000398027 2356 ntAPPRIS P3 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 AL355312.1-201ENST00000407115 2176 ntBASIC16.89■□□□□ 0.29
EXOSC8Q96B26 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 TJP1-212ENST00000614355 6977 ntAPPRIS ALT2 TSL 5 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC16.89■□□□□ 0.29
EXOSC8Q96B26 MYH14-202ENST00000376970 6787 ntAPPRIS ALT2 TSL 5 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 GSKIP-207ENST00000556095 3834 ntAPPRIS P1 TSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 PSRC1-204ENST00000369909 1742 ntAPPRIS P3 TSL 1 (best) BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 ZCCHC23-201ENST00000500526 1951 ntTSL 2 BASIC16.88■□□□□ 0.29
EXOSC8Q96B26 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.88■□□□□ 0.29
Retrieved 100 of 98,524 protein–RNA pairs in 56.1 ms