Protein–RNA interactions for Protein: Q92541

RTF1, RNA polymerase-associated protein RTF1 homolog, humanhuman

Known RBP Predictions only

Length 710 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1Q92541 ANHX-202ENST00000545940 3452 ntAPPRIS P1 TSL 5 BASIC23.16■■□□□ 1.3
RTF1Q92541 FLJ13224-201ENST00000313737 1514 ntBASIC23.16■■□□□ 1.3
RTF1Q92541 DPF3-204ENST00000546183 1514 ntTSL 2 BASIC23.16■■□□□ 1.3
RTF1Q92541 GNAZ-203ENST00000615612 3333 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTF1Q92541 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC23.16■■□□□ 1.3
RTF1Q92541 RAD23A-201ENST00000316856 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTF1Q92541 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTF1Q92541 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTF1Q92541 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC23.16■■□□□ 1.3
RTF1Q92541 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
RTF1Q92541 PLA2R1-202ENST00000392771 5160 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 C1orf198-201ENST00000366663 3858 ntAPPRIS P3 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 TMEM216-201ENST00000334888 1306 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RTF1Q92541 PIF1-205ENST00000559239 2677 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 RAB17-203ENST00000409576 466 ntTSL 3 BASIC23.15■■□□□ 1.3
RTF1Q92541 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC23.15■■□□□ 1.3
RTF1Q92541 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 CERS5-203ENST00000422340 2855 ntAPPRIS ALT2 TSL 2 BASIC23.15■■□□□ 1.3
RTF1Q92541 TEX264-215ENST00000611400 1488 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 PCSK5-202ENST00000376767 2845 ntTSL 2 BASIC23.15■■□□□ 1.3
RTF1Q92541 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 RNH1-201ENST00000354420 1894 ntAPPRIS P1 TSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 GPC2-201ENST00000292377 2532 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 GORASP1-206ENST00000422110 2523 ntTSL 2 BASIC23.15■■□□□ 1.3
RTF1Q92541 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 MEST-201ENST00000223215 2465 ntAPPRIS P4 TSL 1 (best) BASIC23.15■■□□□ 1.3
RTF1Q92541 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC23.15■■□□□ 1.3
RTF1Q92541 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC23.15■■□□□ 1.3
RTF1Q92541 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC23.14■■□□□ 1.3
RTF1Q92541 NSUN5P2-205ENST00000602348 1776 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RTF1Q92541 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC23.14■■□□□ 1.3
RTF1Q92541 IL9RP2-201ENST00000423948 1312 ntBASIC23.14■■□□□ 1.3
RTF1Q92541 HTD2-201ENST00000461393 1508 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTF1Q92541 BX276092.7-203ENST00000637198 1536 ntBASIC23.14■■□□□ 1.3
RTF1Q92541 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTF1Q92541 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTF1Q92541 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.3
RTF1Q92541 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 PTH2-201ENST00000270631 459 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC23.14■■□□□ 1.29
RTF1Q92541 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 RPS2P1-201ENST00000434010 821 ntBASIC23.14■■□□□ 1.29
RTF1Q92541 DDX43P3-201ENST00000441064 443 ntBASIC23.14■■□□□ 1.29
RTF1Q92541 NKTR-203ENST00000442970 646 ntTSL 2 BASIC23.14■■□□□ 1.29
RTF1Q92541 MTHFSD-203ENST00000543303 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 C12orf76-202ENST00000546627 461 ntTSL 4 BASIC23.14■■□□□ 1.29
RTF1Q92541 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC23.14■■□□□ 1.29
RTF1Q92541 AL049840.3-201ENST00000602669 611 ntBASIC23.14■■□□□ 1.29
RTF1Q92541 PRKN-208ENST00000610470 531 ntTSL 2 BASIC23.14■■□□□ 1.29
RTF1Q92541 PRKN-209ENST00000612485 225 ntTSL 5 BASIC23.14■■□□□ 1.29
RTF1Q92541 MTHFSD-220ENST00000634347 1207 ntAPPRIS P3 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC23.14■■□□□ 1.29
RTF1Q92541 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC23.14■■□□□ 1.29
RTF1Q92541 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC23.14■■□□□ 1.29
RTF1Q92541 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC23.14■■□□□ 1.29
RTF1Q92541 AC079776.2-201ENST00000641154 1609 ntBASIC23.14■■□□□ 1.29
RTF1Q92541 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 C2CD2L-205ENST00000528586 2320 ntTSL 2 BASIC23.14■■□□□ 1.29
RTF1Q92541 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC23.14■■□□□ 1.29
RTF1Q92541 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTF1Q92541 C1QTNF1-201ENST00000311661 2624 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 MAPRE3-201ENST00000233121 1892 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTF1Q92541 ANKS3-230ENST00000614075 2387 ntAPPRIS P1 TSL 5 BASIC23.13■■□□□ 1.29
RTF1Q92541 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 RNPS1-205ENST00000561718 1806 ntTSL 3 BASIC23.13■■□□□ 1.29
RTF1Q92541 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTF1Q92541 AC005865.2-201ENST00000505276 2303 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 TEAD4-201ENST00000358409 1637 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTF1Q92541 DCAF8-218ENST00000610139 1607 ntTSL 1 (best) BASIC23.13■■□□□ 1.29
RTF1Q92541 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC23.13■■□□□ 1.29
RTF1Q92541 TEX30-205ENST00000376029 959 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 POM121L12-201ENST00000408890 1283 ntAPPRIS P1 BASIC23.13■■□□□ 1.29
RTF1Q92541 AP006621.3-203ENST00000525941 610 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 PNMT-203ENST00000581428 677 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 TMED1-207ENST00000591695 809 ntTSL 5 BASIC23.13■■□□□ 1.29
RTF1Q92541 MTDHP4-201ENST00000600287 670 ntBASIC23.13■■□□□ 1.29
RTF1Q92541 AC025062.2-201ENST00000605477 670 ntBASIC23.13■■□□□ 1.29
RTF1Q92541 AL512343.2-201ENST00000609423 490 ntTSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 MIR7706-201ENST00000613747 67 ntBASIC23.13■■□□□ 1.29
RTF1Q92541 AC243547.2-201ENST00000616257 234 ntTSL 3 BASIC23.13■■□□□ 1.29
RTF1Q92541 NBL1-212ENST00000621723 2133 ntAPPRIS P3 TSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC23.13■■□□□ 1.29
RTF1Q92541 AC073592.5-201ENST00000624854 528 ntBASIC23.13■■□□□ 1.29
RTF1Q92541 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC23.13■■□□□ 1.29
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms