Protein–RNA interactions for Protein: Q8WWI5

SLC44A1, Choline transporter-like protein 1, humanhuman

Predictions only

Length 657 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A1Q8WWI5 CHCHD6-201ENST00000290913 1006 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 HES2-202ENST00000377836 507 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 RNF165-206ENST00000590330 1049 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 FAM87A-204ENST00000613235 858 ntBASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 AC010947.1-201ENST00000623454 693 ntBASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 CROCCP2-205ENST00000639481 1296 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 UBN1-201ENST00000262376 6252 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 LINC00847-201ENST00000501855 1871 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 EML3-201ENST00000278845 3017 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 AL118508.1-201ENST00000613502 2345 ntBASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 GCGR-201ENST00000400723 2051 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 FBXO18-203ENST00000397269 3640 ntTSL 5 BASIC17.83■□□□□ 0.44
SLC44A1Q8WWI5 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 ADAM10-205ENST00000461408 1932 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 SLC27A2-201ENST00000267842 2394 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 GMDS-208ENST00000530927 1440 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 AC016396.2-201ENST00000562575 1417 ntBASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 CACNB3-202ENST00000536187 1872 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 ZNF454-201ENST00000320129 2332 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 EP300-201ENST00000263253 9587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 RUNX1-203ENST00000358356 2720 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 TNRC18P3-201ENST00000441896 2691 ntBASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 FOXD4L4-201ENST00000377413 2230 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 LINC00937-205ENST00000538304 2157 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 DNPH1-202ENST00000393987 796 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 AC134349.1-201ENST00000543969 385 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 C12orf76-208ENST00000551185 496 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 TK1-205ENST00000590862 642 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 USF2-205ENST00000594064 1179 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 RNASET2-213ENST00000611959 1124 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 SCARB2-223ENST00000640640 4608 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 RHNO1-209ENST00000618250 2070 ntAPPRIS P3 TSL 4 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 OGG1-206ENST00000349503 1950 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 KLHL24-201ENST00000242810 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 B3GNT3-201ENST00000318683 2226 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 KRT89P-201ENST00000620027 1478 ntBASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 ESAM-201ENST00000278927 1826 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
SLC44A1Q8WWI5 SUZ12-204ENST00000580398 3977 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 KRT8P9-201ENST00000558927 1449 ntBASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 RUVBL1-201ENST00000322623 1761 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 YARS2-201ENST00000324868 2122 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 LINC00336-201ENST00000477984 2107 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 RENBP-202ENST00000393700 1388 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 DPP9-AS1-201ENST00000381796 3071 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 MIB2-232ENST00000520777 3321 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 PCDHGC3-205ENST00000617641 2346 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 GALNT17-201ENST00000333538 3884 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 CCDC62-201ENST00000253079 3546 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 AC002467.1-201ENST00000457510 657 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 AC104596.1-202ENST00000507486 759 ntTSL 3 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 MRPL52-210ENST00000555345 895 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 SERPINH1-201ENST00000358171 2225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 C22orf39-205ENST00000542103 1523 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 AKIRIN1-202ENST00000432648 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 SLC22A3-201ENST00000275300 3348 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 PRDM5-203ENST00000428209 2338 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
SLC44A1Q8WWI5 SERPINA4-202ENST00000555095 1987 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 MAFB-201ENST00000373313 3393 ntAPPRIS P1 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 ITGB7-202ENST00000422257 2791 ntAPPRIS P1 TSL 5 BASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 KRT17P2-201ENST00000300992 1314 ntBASIC17.8■□□□□ 0.44
SLC44A1Q8WWI5 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 43.8 ms