Protein–RNA interactions for Protein: Q8WV60

PTCD2, Pentatricopeptide repeat-containing protein 2, mitochondrial, humanhuman

Known RBP Predictions only

Length 388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2Q8WV60 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 CEACAM16-202ENST00000587331 1692 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 CTSB-204ENST00000453527 2011 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 TXNRD2-218ENST00000542719 2024 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 TRIM13-206ENST00000457662 1489 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 PRSS36-201ENST00000268281 2840 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 PGLS-201ENST00000252603 1028 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 IGHGP-201ENST00000390555 1178 ntBASIC18.03■□□□□ 0.48
PTCD2Q8WV60 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 DDX43P3-201ENST00000441064 443 ntBASIC18.03■□□□□ 0.48
PTCD2Q8WV60 DUSP5P1-201ENST00000441325 1139 ntBASIC18.03■□□□□ 0.48
PTCD2Q8WV60 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 AP002414.4-201ENST00000589764 1148 ntBASIC18.03■□□□□ 0.48
PTCD2Q8WV60 CLEC4GP1-201ENST00000596555 870 ntBASIC18.03■□□□□ 0.48
PTCD2Q8WV60 REXO2-220ENST00000611665 1158 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 TFRC-202ENST00000392396 5032 ntAPPRIS P3 TSL 1 (best) BASIC18.03■□□□□ 0.48
PTCD2Q8WV60 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 TMEM216-203ENST00000515837 1958 ntAPPRIS P2 TSL 2 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 LUC7L-202ENST00000337351 2097 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 TTLL12-201ENST00000216129 3385 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 MPIG6B-205ENST00000375810 910 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 MPI-205ENST00000562606 1052 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 MALAT1-215ENST00000619449 794 ntTSL 3 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC18.02■□□□□ 0.48
PTCD2Q8WV60 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 JMJD4-207ENST00000620518 2432 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 C17orf62-202ENST00000342572 1849 ntTSL 2 BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 TACSTD2-201ENST00000371225 2351 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 CCDC92-201ENST00000238156 2787 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
PTCD2Q8WV60 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 NDUFA10-202ENST00000307300 1313 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 ARPC1B-201ENST00000252725 1551 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 CRMP1-202ENST00000397890 2911 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 C21orf2-201ENST00000325223 1283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 EFCAB2-203ENST00000366523 1233 ntAPPRIS P1 TSL 3 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 OR2J1-201ENST00000377171 1273 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 CHCHD2P8-201ENST00000429873 447 ntBASIC18.01■□□□□ 0.47
PTCD2Q8WV60 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 CHMP2A-208ENST00000601220 885 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 VPS72-207ENST00000640458 689 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.01■□□□□ 0.47
PTCD2Q8WV60 AC133963.1-201ENST00000504166 1679 ntBASIC18.01■□□□□ 0.47
PTCD2Q8WV60 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 CMTM3-214ENST00000567572 1934 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 MTHFD2L-203ENST00000395759 2354 ntAPPRIS P2 TSL 5 BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
PTCD2Q8WV60 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms