Protein–RNA interactions for Protein: Q8TBN0

RAB3IL1, Guanine nucleotide exchange factor for Rab-3A, humanhuman

Predictions only

Length 382 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IL1Q8TBN0 DNAAF4-202ENST00000348518 1897 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 ARHGEF5-202ENST00000471847 1862 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 ETV7-204ENST00000373738 1570 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 ETV7-207ENST00000620358 1599 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 C9orf129-201ENST00000375419 1154 ntAPPRIS P1 TSL 5 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 INS-203ENST00000397262 639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 LRFN3-201ENST00000246529 2513 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 ZIC5-201ENST00000267294 4639 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 TRIM74-201ENST00000285805 1350 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 TRIM73-201ENST00000323819 1358 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 NSD3-201ENST00000316985 3995 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 IGSF8-201ENST00000314485 2343 ntAPPRIS P2 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 IGFBP3-203ENST00000381086 2322 ntTSL 2 BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 RWDD1-202ENST00000466444 5522 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
RAB3IL1Q8TBN0 RTN4-207ENST00000402434 1456 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 SIDT2-217ENST00000532062 2143 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 LRRC27-214ENST00000625755 1738 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 DHRS4-204ENST00000543741 1340 ntTSL 2 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 AC022898.2-201ENST00000616822 1312 ntBASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 METTL9-201ENST00000358154 3256 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 GALNT9-201ENST00000328957 2410 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 AC096537.1-201ENST00000437416 684 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 RARRES2P10-201ENST00000564312 460 ntBASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 AL031600.3-201ENST00000566287 1124 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 ICAM2-207ENST00000579687 1154 ntAPPRIS P1 TSL 3 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 CRTC3-202ENST00000420329 5209 ntAPPRIS ALT1 TSL 2 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 RBCK1-202ENST00000356286 2774 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 LBX2-AS1-201ENST00000548978 1852 ntTSL 3 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 VWA1-203ENST00000476993 4511 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 RTKN2-203ENST00000395260 2076 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 DNM1-216ENST00000634267 2909 ntTSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 DAB2IP-201ENST00000259371 5469 ntAPPRIS P4 TSL 5 BASIC17.75■□□□□ 0.43
RAB3IL1Q8TBN0 GCSH-209ENST00000639689 2412 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 PHKA1-202ENST00000373539 4476 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 PALM-201ENST00000264560 2755 ntAPPRIS ALT2 TSL 4 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 RASL10B-201ENST00000603017 3205 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 SNX16-201ENST00000345957 1853 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 AC007326.2-201ENST00000624224 7579 ntBASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 LGALS7-201ENST00000378626 466 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 SNCB-202ENST00000393693 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 POLR2J-202ENST00000393794 784 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 MFAP1P1-201ENST00000442257 1255 ntBASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 SPINK2-202ENST00000504762 659 ntAPPRIS ALT2 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 LINC01451-201ENST00000623792 534 ntBASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 FBXL20-205ENST00000583610 1739 ntAPPRIS P1 TSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 MOB3B-201ENST00000262244 6454 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 FAM129B-201ENST00000373312 3957 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 TNXB-204ENST00000479795 2742 ntTSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 C17orf113-201ENST00000587304 3746 ntAPPRIS P1 TSL 5 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 HNRNPA0-201ENST00000314940 8726 ntAPPRIS P1 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 RUNX2-204ENST00000371438 5698 ntAPPRIS P4 TSL 5 BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 KRT15-201ENST00000254043 5237 ntAPPRIS P1 TSL 1 (best) BASIC17.74■□□□□ 0.43
RAB3IL1Q8TBN0 AL162311.3-201ENST00000555918 2867 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 RB1CC1-202ENST00000435644 6614 ntAPPRIS ALT1 TSL 1 (best) BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.73■□□□□ 0.43
RAB3IL1Q8TBN0 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC17.73■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 37.2 ms