Protein–RNA interactions for Protein: Q8TAQ2

SMARCC2, SWI/SNF complex subunit SMARCC2, humanhuman

Predictions only

Length 1,214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2Q8TAQ2 C1QTNF1-205ENST00000578229 1294 ntTSL 4 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 IL11-204ENST00000590625 1028 ntTSL 2 BASIC20.83■□□□□ 0.93
SMARCC2Q8TAQ2 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCC2Q8TAQ2 KCNC4-204ENST00000438661 2953 ntAPPRIS ALT2 TSL 1 (best) BASIC20.83■□□□□ 0.92
SMARCC2Q8TAQ2 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC20.83■□□□□ 0.92
SMARCC2Q8TAQ2 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC20.83■□□□□ 0.92
SMARCC2Q8TAQ2 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC20.83■□□□□ 0.92
SMARCC2Q8TAQ2 TCIRG1-201ENST00000265686 2677 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 KLHL22-201ENST00000328879 2616 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 GTF2IP1-210ENST00000622829 3605 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 PDCD7-201ENST00000204549 2851 ntAPPRIS P2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 GUSBP12-201ENST00000513727 720 ntBASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 MIR3180-1-201ENST00000580374 94 ntBASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 MIR3180-3-201ENST00000584616 94 ntBASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 C8orf34-206ENST00000518698 2223 ntAPPRIS P2 TSL 2 BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 RBM17-201ENST00000379888 2755 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 IFIH1-202ENST00000421365 1617 ntTSL 1 (best) BASIC20.82■□□□□ 0.92
SMARCC2Q8TAQ2 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 GCDH-201ENST00000222214 1956 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 PYGL-201ENST00000216392 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 GAB1-201ENST00000262994 2648 ntAPPRIS ALT1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ARNT-212ENST00000515192 2892 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 AC141586.5-201ENST00000624546 2050 ntBASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 MAPKAPK3-208ENST00000621469 2563 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 USH1C-205ENST00000527020 2159 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 AC108860.2-201ENST00000562760 2183 ntBASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 DDX43P3-201ENST00000441064 443 ntBASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 CHCHD3-203ENST00000448878 1038 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ZNF346-205ENST00000506693 1276 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 GPHA2-202ENST00000532246 466 ntTSL 3 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 RTBDN-213ENST00000592204 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 DNM1P34-201ENST00000567292 2276 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ORAI2-202ENST00000403646 2528 ntAPPRIS P1 TSL 2 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 CCDC115-201ENST00000259229 1646 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 SIGIRR-203ENST00000431843 1720 ntAPPRIS P1 TSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 AC002310.2-202ENST00000492040 1488 ntTSL 1 (best) BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 MED29-202ENST00000594368 1471 ntTSL 2 BASIC20.81■□□□□ 0.92
SMARCC2Q8TAQ2 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 MIEF2-204ENST00000395706 2441 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 HSPB9-201ENST00000565659 1922 ntAPPRIS P1 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 PPP1R16A-202ENST00000435887 2273 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 PCAT7-201ENST00000452148 1164 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 BOC-211ENST00000484034 1286 ntTSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 AC011511.2-201ENST00000592893 918 ntTSL 3 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 AC124864.1-201ENST00000623408 392 ntBASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 ALKBH3-201ENST00000302708 1474 ntAPPRIS P1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC20.8■□□□□ 0.92
SMARCC2Q8TAQ2 DNM3-203ENST00000367733 2322 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 TAL1-202ENST00000371884 4642 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 CTSB-232ENST00000534510 1989 ntAPPRIS P1 TSL 5 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 BOC-212ENST00000485230 2173 ntTSL 2 BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 PKP3-201ENST00000331563 2809 ntAPPRIS P1 TSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 RAD51-203ENST00000423169 1611 ntTSL 1 (best) BASIC20.79■□□□□ 0.92
SMARCC2Q8TAQ2 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC20.79■□□□□ 0.92
Retrieved 100 of 98,524 protein–RNA pairs in 55 ms