Protein–RNA interactions for Protein: Q8NI28

LINC01006, Putative uncharacterized protein encoded by LINC01006, humanhuman

Predictions only

Length 216 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01006Q8NI28 WIPI2-211ENST00000484262 1504 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 PIP4K2C-202ENST00000422156 1558 ntTSL 2 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 NSUN5-201ENST00000252594 1672 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 CYP2D6-203ENST00000360608 1684 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 AC018445.3-201ENST00000624177 1945 ntBASIC13.78□□□□□ -0.2
LINC01006Q8NI28 ACSM2A-201ENST00000219054 1988 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 ALDH5A1-201ENST00000348925 2266 ntAPPRIS P4 TSL 1 (best) BASIC13.78□□□□□ -0.2
LINC01006Q8NI28 CDH23-212ENST00000616684 4814 ntTSL 5 BASIC13.77□□□□□ -0.2
LINC01006Q8NI28 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 FGFBP2-201ENST00000259989 1168 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 KLHL23-201ENST00000272797 2087 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 CRADD-201ENST00000332896 1169 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 PDE9A-203ENST00000335440 1728 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 MID1IP1-201ENST00000336949 2536 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 RGS20-203ENST00000344277 1667 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 RPL36-201ENST00000347512 707 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 ARMC9-201ENST00000349938 2300 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 GUK1-203ENST00000366718 1275 ntAPPRIS P3 TSL 3 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 GID4-202ENST00000376345 1391 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 NFKBIB-202ENST00000392079 991 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 PTHLH-203ENST00000395872 1318 ntAPPRIS ALT1 TSL 5 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 IFRD2-204ENST00000436390 2275 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 HMGN1P19-201ENST00000436976 333 ntBASIC13.77□□□□□ -0.21
LINC01006Q8NI28 PRSS29P-201ENST00000440800 595 ntBASIC13.77□□□□□ -0.21
LINC01006Q8NI28 GAS2L1P2-202ENST00000442849 2262 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 AC093627.6-201ENST00000478759 1365 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 MAG-203ENST00000537831 2341 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 ATP6V0D1-203ENST00000540149 1262 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 ROBO3-221ENST00000543966 1520 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 AL390334.1-205ENST00000555797 411 ntTSL 3 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 BLOC1S6-202ENST00000562384 494 ntTSL 4 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 FIGNL2-201ENST00000564840 4693 ntAPPRIS P1 TSL 5 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 AC109462.3-201ENST00000573934 613 ntBASIC13.77□□□□□ -0.21
LINC01006Q8NI28 AC019129.2-201ENST00000609837 1235 ntBASIC13.77□□□□□ -0.21
LINC01006Q8NI28 LINC01666-201ENST00000623794 845 ntTSL 5 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC13.77□□□□□ -0.21
LINC01006Q8NI28 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 LYRM9-203ENST00000460380 2196 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 NPFFR2-201ENST00000308744 1922 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 C10orf111-201ENST00000624760 1714 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 RND1-201ENST00000309739 1681 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 PC-208ENST00000529047 1607 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 NKIRAS2-207ENST00000449471 1461 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 MYO15B-232ENST00000610510 9195 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 TYROBP-201ENST00000262629 568 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 YIF1B-203ENST00000339413 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 HCCS-203ENST00000380763 1000 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 AC116612.1-201ENST00000557144 562 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 PSME1-205ENST00000559123 1033 ntTSL 5 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 ZFPM1-204ENST00000563351 808 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 TNFRSF13B-203ENST00000579315 600 ntAPPRIS ALT2 TSL 3 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 OR5AH1P-202ENST00000597822 431 ntTSL 3 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 AL596442.2-201ENST00000610240 980 ntBASIC13.76□□□□□ -0.21
LINC01006Q8NI28 AC092865.6-201ENST00000642101 219 ntBASIC13.76□□□□□ -0.21
LINC01006Q8NI28 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 RARA-201ENST00000254066 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC13.76□□□□□ -0.21
LINC01006Q8NI28 WWC3-201ENST00000380861 6647 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 MYC-207ENST00000621592 2366 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 TRH-202ENST00000507066 1580 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 TBC1D10C-203ENST00000526387 1520 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 ACADVL-205ENST00000543245 2227 ntTSL 2 BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 FMN2-201ENST00000319653 6434 ntAPPRIS P1 TSL 5 BASIC13.75□□□□□ -0.21
LINC01006Q8NI28 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Retrieved 100 of 98,524 protein–RNA pairs in 56.5 ms