Protein–RNA interactions for Protein: Q8NFR7

CCDC148, Coiled-coil domain-containing protein 148, humanhuman

Predictions only

Length 591 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC148Q8NFR7 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 LYSMD4-201ENST00000332728 2847 ntTSL 4 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 SAMD3-202ENST00000368134 2377 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 NOC2LP2-201ENST00000407594 1944 ntBASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 MEN1-203ENST00000337652 3162 ntAPPRIS P3 TSL 5 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 ALDH5A1-202ENST00000357578 5248 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 TLK2-203ENST00000346027 3449 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 RPL36-202ENST00000394580 556 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 AC096633.1-201ENST00000422446 749 ntBASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 LINC01315-202ENST00000424852 1142 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 AC051649.1-201ENST00000509204 330 ntTSL 3 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 TMEM110-201ENST00000355083 4769 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 HIC1-202ENST00000399849 3156 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 C18orf8-208ENST00000590868 2002 ntTSL 2 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 LTBP4-203ENST00000308370 4948 ntAPPRIS P4 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 SRSF1-208ENST00000584773 1317 ntTSL 5 BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
CCDC148Q8NFR7 AC009949.1-201ENST00000623048 1830 ntBASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 IVNS1ABP-202ENST00000367498 4199 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 WAC-202ENST00000347934 2839 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 TBC1D3P5-201ENST00000579401 1545 ntBASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 BEGAIN-211ENST00000637646 2911 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 LINC00882-201ENST00000473636 710 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 MPI-205ENST00000562606 1052 ntTSL 3 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 AL138831.2-201ENST00000606564 490 ntBASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 AC005258.1-201ENST00000621615 1268 ntAPPRIS P1 TSL 2 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 AC068446.2-201ENST00000500487 2165 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 AC125634.1-201ENST00000438758 1403 ntBASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 APP-203ENST00000354192 3167 ntTSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 AC097374.2-201ENST00000618617 1306 ntBASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 BECN1-201ENST00000361523 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 CLPB-212ENST00000543042 2133 ntTSL 2 BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 FZR1-202ENST00000395095 1491 ntAPPRIS ALT1 TSL 1 (best) BASIC20.5■□□□□ 0.87
CCDC148Q8NFR7 SMOC1-201ENST00000361956 2040 ntAPPRIS ALT1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 MRPL4-203ENST00000393733 1620 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 KDM8-202ENST00000441782 1612 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 HNF1A-202ENST00000400024 2337 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 SNAP91-201ENST00000195649 4434 ntAPPRIS ALT2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 SNAP91-204ENST00000369694 4449 ntAPPRIS P2 TSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 DACT2-201ENST00000366795 2942 ntAPPRIS P3 TSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 UBE3A-201ENST00000232165 5051 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 NT5E-202ENST00000369646 974 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 CYHR1-203ENST00000424149 1162 ntTSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 HCG4P8-203ENST00000443049 980 ntBASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 KRT17P6-201ENST00000453795 1220 ntBASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 AC091607.1-201ENST00000490318 1060 ntBASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 NDUFB9-202ENST00000517367 636 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 ZNF688-207ENST00000567855 540 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 AP005901.3-202ENST00000581653 237 ntBASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 PSMD4-201ENST00000368881 1333 ntTSL 5 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 AC022916.1-201ENST00000590478 2658 ntTSL 2 BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC20.49■□□□□ 0.87
CCDC148Q8NFR7 SPAST-202ENST00000345662 5116 ntAPPRIS ALT1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 ABHD14B-203ENST00000395008 1818 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 MPP2-206ENST00000518766 1896 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 NLE1-201ENST00000360831 1726 ntTSL 5 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 FDXR-203ENST00000420580 1705 ntTSL 2 BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 CDHR1-201ENST00000332904 2694 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
CCDC148Q8NFR7 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC20.48■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 25.7 ms