Protein–RNA interactions for Protein: Q8NDZ2

SIMC1, SUMO-interacting motif-containing protein 1, humanhuman

Predictions only

Length 872 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SIMC1Q8NDZ2 BIRC7-203ENST00000395306 593 ntTSL 2 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 DUTP2-201ENST00000519164 463 ntBASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 AL121956.5-201ENST00000625261 221 ntBASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 IGF2-207ENST00000434045 1583 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 RUNX2-202ENST00000371432 5487 ntAPPRIS ALT2 TSL 5 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 AL391005.1-201ENST00000623953 2435 ntBASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 TMEM119-201ENST00000392806 2707 ntAPPRIS P2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 PRSS36-207ENST00000569305 2723 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 EWSR1-206ENST00000397938 2654 ntAPPRIS ALT2 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 ADK-202ENST00000372734 2083 ntAPPRIS ALT1 TSL 1 (best) BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC16.79■□□□□ 0.28
SIMC1Q8NDZ2 FLT1-201ENST00000282397 7092 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 PJA1-201ENST00000361478 2755 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 XXYLT1-201ENST00000310380 2727 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 INPP5A-203ENST00000368594 2967 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 CBFB-202ENST00000412916 2971 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 BPGM-203ENST00000418040 1870 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 TRIM9-201ENST00000298355 5284 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 HS3ST2-201ENST00000261374 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 AC046158.3-201ENST00000624947 2558 ntBASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ZNF575-201ENST00000314228 1298 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ZFAND2A-201ENST00000316495 860 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ZFAND2A-203ENST00000401903 968 ntTSL 3 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 PAX3-208ENST00000409828 1254 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 MIR3936HG-202ENST00000457998 733 ntTSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 AC011498.5-201ENST00000592027 486 ntBASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 CALM2-209ENST00000628793 1103 ntTSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 TRABD-202ENST00000380909 2272 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 KCNQ2-207ENST00000370224 3004 ntTSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 CHID1-203ENST00000436108 1477 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 TBC1D10C-209ENST00000542590 1659 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 ZNF454-202ENST00000519564 2142 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 HTR7P1-202ENST00000624664 4411 ntBASIC16.78■□□□□ 0.28
SIMC1Q8NDZ2 AHCYL2-201ENST00000325006 5056 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 NUDT19-201ENST00000397061 2967 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 CHRD-202ENST00000348986 3155 ntAPPRIS ALT2 TSL 5 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 CSAD-209ENST00000453446 1774 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 AC084018.2-201ENST00000613093 2607 ntBASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 TMEM198-201ENST00000344458 2393 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 RNF112-201ENST00000461366 3212 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 ABCB9-207ENST00000442833 2587 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 GGT1-208ENST00000404920 657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 PCED1CP-201ENST00000419887 785 ntBASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 TSPY22P-201ENST00000427496 604 ntBASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 CATIP-AS1-202ENST00000441749 480 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 GGTLC2-203ENST00000480559 657 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 AF186192.2-201ENST00000524514 423 ntTSL 3 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 AKTIP-212ENST00000570004 1162 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 AC008687.5-201ENST00000593746 558 ntBASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
SIMC1Q8NDZ2 DENND5B-201ENST00000354285 3132 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 KRT16P6-201ENST00000417510 1873 ntTSL 5 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 GATB-213ENST00000515812 1893 ntTSL 5 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
SIMC1Q8NDZ2 NEXN-AS1-201ENST00000421331 2292 ntTSL 2 BASIC16.77■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 39.8 ms