Protein–RNA interactions for Protein: Q8N5R6

CCDC33, Coiled-coil domain-containing protein 33, humanhuman

Predictions only

Length 958 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC33Q8N5R6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 PLA2G4C-222ENST00000599921 1984 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 COL18A1-202ENST00000355480 5924 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 ASL-204ENST00000395331 1538 ntTSL 5 BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 MECP2-205ENST00000453960 1729 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC18.69■□□□□ 0.58
CCDC33Q8N5R6 KAZN-208ENST00000636203 6874 ntTSL 5 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 ZNF274-202ENST00000345813 2678 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 STIM2-212ENST00000639640 2241 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 GNG5-202ENST00000370645 790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 MOBP-204ENST00000420739 940 ntAPPRIS P4 TSL 5 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 EEF1E1-202ENST00000429723 562 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 AC020909.1-201ENST00000599632 1265 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 Metazoa_SRP.104-201ENST00000622099 280 ntBASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 SPACA1-201ENST00000237201 1499 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 CD81-AS1-201ENST00000413483 1460 ntTSL 2 BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 AC132938.6-201ENST00000623828 1655 ntBASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 SLC35F3-201ENST00000366617 2762 ntAPPRIS ALT1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 NOX4-201ENST00000263317 2388 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 ARID1B-203ENST00000350026 7962 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
CCDC33Q8N5R6 SPSB4-201ENST00000310546 2908 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 TRAM1-205ENST00000521425 3394 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 LINC00602-201ENST00000629776 2065 ntBASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 FBXO33-201ENST00000298097 3853 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 TBX2-201ENST00000240328 3339 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 PAK4-209ENST00000599470 1715 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 KCNE3-201ENST00000310128 3143 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 ATP5J-201ENST00000284971 614 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 SFTPD-201ENST00000372292 1281 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 EXOSC3-202ENST00000396521 768 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 DMKN-215ENST00000451297 1111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 KRT16P4-201ENST00000453883 522 ntBASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 PPOX-214ENST00000535223 664 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 AC007220.1-201ENST00000572466 1055 ntTSL 3 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 H3F3B-206ENST00000587560 551 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 MVK-201ENST00000228510 1956 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 RBCK1-203ENST00000382181 2208 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 SKOR1-202ENST00000380035 3675 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 AC012317.2-201ENST00000623305 2251 ntBASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 FST-202ENST00000396947 2538 ntTSL 5 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 GLCCI1-201ENST00000223145 4743 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 COPS7A-210ENST00000539735 1832 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 STX2-201ENST00000261653 3331 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 TMEM255B-202ENST00000375353 6100 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 AL353692.3-201ENST00000407031 1396 ntBASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 AC093010.1-201ENST00000473625 1624 ntBASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
CCDC33Q8N5R6 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 RETREG1-201ENST00000306320 3268 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 GTF2H4-201ENST00000259895 1735 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 ZBTB4-201ENST00000311403 5956 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SP3-203ENST00000418194 3937 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 ZDHHC8P1-204ENST00000433168 2309 ntTSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SDHA-204ENST00000504309 2067 ntTSL 5 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 CD1E-203ENST00000368156 861 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 CDKN1C-201ENST00000380725 1220 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 CXorf40A-202ENST00000393985 1148 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 SBDSP1-202ENST00000423945 618 ntTSL 3 BASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 IGHV3-47-201ENST00000425060 335 ntBASIC18.66■□□□□ 0.58
CCDC33Q8N5R6 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.66■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 36 ms