Protein–RNA interactions for Protein: Q8N187

CARF, Calcium-responsive transcription factor, humanhuman

Predictions only

Length 725 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CARFQ8N187 HNRNPDL-210ENST00000630827 1318 ntAPPRIS ALT2 TSL 5 BASIC16.82■□□□□ 0.28
CARFQ8N187 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CARFQ8N187 CREM-211ENST00000374726 1207 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CARFQ8N187 PMS2P1-201ENST00000431037 1228 ntBASIC16.82■□□□□ 0.28
CARFQ8N187 LMX1B-203ENST00000526117 1195 ntTSL 1 (best) BASIC16.82■□□□□ 0.28
CARFQ8N187 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC16.82■□□□□ 0.28
CARFQ8N187 SPCS2-207ENST00000530257 612 ntTSL 3 BASIC16.82■□□□□ 0.28
CARFQ8N187 H2AFJ-203ENST00000544848 644 ntAPPRIS P1 BASIC16.82■□□□□ 0.28
CARFQ8N187 CD63-204ENST00000546939 779 ntTSL 3 BASIC16.82■□□□□ 0.28
CARFQ8N187 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC16.82■□□□□ 0.28
CARFQ8N187 AC145285.3-201ENST00000564603 959 ntBASIC16.82■□□□□ 0.28
CARFQ8N187 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC16.82■□□□□ 0.28
CARFQ8N187 MIEN1-205ENST00000577810 806 ntTSL 3 BASIC16.82■□□□□ 0.28
CARFQ8N187 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC16.82■□□□□ 0.28
CARFQ8N187 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC16.82■□□□□ 0.28
CARFQ8N187 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC16.82■□□□□ 0.28
CARFQ8N187 AC116407.3-201ENST00000623905 1129 ntBASIC16.82■□□□□ 0.28
CARFQ8N187 KLHL33-202ENST00000636854 2394 ntAPPRIS P1 TSL 5 BASIC16.82■□□□□ 0.28
CARFQ8N187 AP003774.1-201ENST00000316124 2340 ntTSL 2 BASIC16.82■□□□□ 0.28
CARFQ8N187 SORCS2-203ENST00000507866 6152 ntAPPRIS P2 TSL 1 (best) BASIC16.82■□□□□ 0.28
CARFQ8N187 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC16.82■□□□□ 0.28
CARFQ8N187 KIZ-211ENST00000619574 1971 ntAPPRIS ALT2 TSL 2 BASIC16.82■□□□□ 0.28
CARFQ8N187 PRPF31-202ENST00000391755 1767 ntTSL 5 BASIC16.82■□□□□ 0.28
CARFQ8N187 CEACAM21-203ENST00000407170 1691 ntTSL 2 BASIC16.81■□□□□ 0.28
CARFQ8N187 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.81■□□□□ 0.28
CARFQ8N187 P2RX5-209ENST00000552276 1642 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CARFQ8N187 BAGE2-202ENST00000474011 1482 ntTSL 2 BASIC16.81■□□□□ 0.28
CARFQ8N187 NCF1C-201ENST00000438382 1427 ntBASIC16.81■□□□□ 0.28
CARFQ8N187 ISCU-205ENST00000535729 1330 ntTSL 2 BASIC16.81■□□□□ 0.28
CARFQ8N187 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.81■□□□□ 0.28
CARFQ8N187 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 AC134772.1-202ENST00000435578 549 ntTSL 4 BASIC16.81■□□□□ 0.28
CARFQ8N187 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC16.81■□□□□ 0.28
CARFQ8N187 BX005266.1-201ENST00000473402 457 ntBASIC16.81■□□□□ 0.28
CARFQ8N187 IDH3B-206ENST00000474315 1279 ntAPPRIS ALT1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 KNCN-203ENST00000481882 1037 ntAPPRIS ALT2 TSL 5 BASIC16.81■□□□□ 0.28
CARFQ8N187 STK19B-204ENST00000512515 211 ntBASIC16.81■□□□□ 0.28
CARFQ8N187 IGHV3-22-201ENST00000520721 359 ntBASIC16.81■□□□□ 0.28
CARFQ8N187 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC16.81■□□□□ 0.28
CARFQ8N187 PNPLA2-201ENST00000336615 2428 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 AC009113.1-201ENST00000570267 2443 ntBASIC16.81■□□□□ 0.28
CARFQ8N187 FGFR2-204ENST00000356226 3547 ntTSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 TAF15-211ENST00000604841 2140 ntAPPRIS ALT2 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 ETFBKMT-202ENST00000395763 2055 ntAPPRIS P1 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC16.81■□□□□ 0.28
CARFQ8N187 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 AC105411.1-202ENST00000565050 1476 ntTSL 5 BASIC16.8■□□□□ 0.28
CARFQ8N187 KLHDC3-201ENST00000244670 1903 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 ACTRT2-201ENST00000378404 1421 ntAPPRIS P1 BASIC16.8■□□□□ 0.28
CARFQ8N187 CYBA-210ENST00000569359 1415 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 HARS-201ENST00000307633 1780 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 PPT2-247ENST00000375143 1754 ntAPPRIS ALT2 TSL 5 BASIC16.8■□□□□ 0.28
CARFQ8N187 FIP1L1-207ENST00000507922 1335 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 MINPP1-201ENST00000371994 2183 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 DPM3-201ENST00000341298 486 ntAPPRIS P1 TSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 AL355310.2-201ENST00000369843 688 ntTSL 3 BASIC16.8■□□□□ 0.28
CARFQ8N187 KRT18P27-201ENST00000427733 1299 ntBASIC16.8■□□□□ 0.28
CARFQ8N187 HCG15-203ENST00000438190 1032 ntTSL 3 BASIC16.8■□□□□ 0.28
CARFQ8N187 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 S100A2-206ENST00000497140 697 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 AC067930.3-201ENST00000524808 701 ntTSL 3 BASIC16.8■□□□□ 0.28
CARFQ8N187 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC16.8■□□□□ 0.28
CARFQ8N187 AL121820.2-201ENST00000556301 279 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 AC106730.1-201ENST00000566722 1090 ntBASIC16.8■□□□□ 0.28
CARFQ8N187 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC16.8■□□□□ 0.28
CARFQ8N187 MIR1199-201ENST00000621445 119 ntBASIC16.8■□□□□ 0.28
CARFQ8N187 SLC26A1-205ENST00000622731 1057 ntTSL 5 BASIC16.8■□□□□ 0.28
CARFQ8N187 LINC01451-201ENST00000623792 534 ntBASIC16.8■□□□□ 0.28
CARFQ8N187 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 AL138828.1-202ENST00000576956 1881 ntTSL 5 BASIC16.8■□□□□ 0.28
CARFQ8N187 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC16.8■□□□□ 0.28
CARFQ8N187 GID4-202ENST00000376345 1391 ntTSL 3 BASIC16.79■□□□□ 0.28
CARFQ8N187 ZNF259P1-201ENST00000407656 1365 ntBASIC16.79■□□□□ 0.28
CARFQ8N187 IRF5-210ENST00000477535 1374 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CARFQ8N187 PPP1R7-201ENST00000234038 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARFQ8N187 BBC3-201ENST00000300880 1347 ntTSL 1 (best) BASIC16.79■□□□□ 0.28
CARFQ8N187 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC16.79■□□□□ 0.28
CARFQ8N187 CHST2-201ENST00000309575 4582 ntAPPRIS P1 TSL 1 (best) BASIC16.79■□□□□ 0.28
CARFQ8N187 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC16.79■□□□□ 0.28
CARFQ8N187 SNHG11-204ENST00000420006 720 ntTSL 3 BASIC16.79■□□□□ 0.28
CARFQ8N187 SNHG11-206ENST00000432153 1181 ntTSL 3 BASIC16.79■□□□□ 0.28
CARFQ8N187 AP000347.1-202ENST00000435868 847 ntBASIC16.79■□□□□ 0.28
CARFQ8N187 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC16.79■□□□□ 0.28
CARFQ8N187 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC16.79■□□□□ 0.28
CARFQ8N187 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC16.79■□□□□ 0.28
Retrieved 100 of 98,524 protein–RNA pairs in 21.5 ms