Protein–RNA interactions for Protein: Q8IXS2

CCDC65, Coiled-coil domain-containing protein 65, humanhuman

Predictions only

Length 484 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC65Q8IXS2 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 KCNC2-203ENST00000393288 2485 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 TAL1-201ENST00000294339 5001 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 AKIRIN1-201ENST00000372984 1330 ntTSL 2 BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
CCDC65Q8IXS2 EWSR1-202ENST00000332035 1989 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 RNF166-203ENST00000541206 2419 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 ZNF74-201ENST00000357502 2788 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 C14orf180-202ENST00000410013 2009 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 AC026471.1-201ENST00000564629 3026 ntBASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 NARFL-218ENST00000568545 2486 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 KHDC1-201ENST00000257765 1134 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 SMIM19-202ENST00000416469 691 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 PCED1CP-201ENST00000419887 785 ntBASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 KHDC1-207ENST00000610435 1101 ntAPPRIS P3 TSL 5 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 CCDC91-220ENST00000545336 2738 ntAPPRIS P1 TSL 5 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 AL355312.1-201ENST00000407115 2176 ntBASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 CYP2D7-208ENST00000614967 1504 ntTSL 5 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 FAM13C-204ENST00000468840 2110 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
CCDC65Q8IXS2 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 PLCG1-AS1-201ENST00000454626 1462 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 POLD4-205ENST00000529704 1486 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 HLA-DQB1-204ENST00000399084 1734 ntAPPRIS P1 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 FIGNL2-202ENST00000618634 4812 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 AGPAT2-205ENST00000538402 1357 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 RBFADN-201ENST00000562391 1350 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 EDA-204ENST00000374553 5272 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 HSD17B10-201ENST00000168216 960 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 DUS3L-201ENST00000309061 2113 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 LCE1D-201ENST00000326233 430 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 RPS19BP1-201ENST00000334678 927 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 NMRK1-202ENST00000376808 1121 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 CFLAR-208ENST00000423241 2128 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 BX890604.1-205ENST00000425492 856 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 DYDC2-206ENST00000444807 1173 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 AC016582.2-201ENST00000591908 446 ntTSL 3 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 HEBP2-204ENST00000607197 10014 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 LUC7L-204ENST00000397783 1504 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 BX276092.7-203ENST00000637198 1536 ntBASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 STAMBPL1-203ENST00000371926 2532 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 PTTG1IP-201ENST00000330938 2760 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 AGAP2-201ENST00000257897 5388 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 LINC01105-206ENST00000456327 1434 ntTSL 5 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 NUDC-201ENST00000321265 1800 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC19.74■□□□□ 0.75
CCDC65Q8IXS2 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 ZNF211-211ENST00000541801 2629 ntAPPRIS ALT2 TSL 3 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 PCDHA5-202ENST00000529859 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 SCNN1D-201ENST00000325425 2679 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 PTDSS1-202ENST00000517309 5177 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 GRK6-202ENST00000355958 1789 ntAPPRIS ALT1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 RAB4B-EGLN2-201ENST00000594136 2554 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 BET1L-202ENST00000332865 533 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 C1QC-203ENST00000374640 1163 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 AC093734.1-201ENST00000416100 242 ntTSL 3 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 AC096633.1-201ENST00000422446 749 ntBASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 TRIM73-203ENST00000437796 1169 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 KRT18P35-201ENST00000510488 1269 ntBASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 SNX1-208ENST00000559844 1971 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 ISG20-201ENST00000306072 1856 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 LETM1P2-201ENST00000597330 2178 ntBASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 UMOD-205ENST00000570689 2315 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 OPRK1-202ENST00000520287 1602 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
CCDC65Q8IXS2 ARFGAP2-229ENST00000627920 2613 ntTSL 2 BASIC19.72■□□□□ 0.75
CCDC65Q8IXS2 POLR3D-201ENST00000306433 1931 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
CCDC65Q8IXS2 PRKAG1-206ENST00000548065 2071 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms