Protein–RNA interactions for Protein: Q8IWZ5

TRIM42, Tripartite motif-containing protein 42, humanhuman

Predictions only

Length 723 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM42Q8IWZ5 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 PTPRCAP-201ENST00000326294 1292 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 AC012618.2-201ENST00000428058 849 ntBASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 MIR3180-4-201ENST00000582223 153 ntBASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 AC233702.5-201ENST00000584107 538 ntBASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 LINC01451-201ENST00000623792 534 ntBASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 PAK4-202ENST00000358301 2739 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SIGIRR-220ENST00000531205 1649 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 FAM99A-201ENST00000382167 1432 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SPATA6L-207ENST00000475086 1444 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 ANKRD29-208ENST00000592179 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 AC068418.2-201ENST00000577309 3703 ntBASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 MYLK2-202ENST00000375994 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 ST6GALNAC6-202ENST00000373141 2424 ntAPPRIS ALT1 TSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 TCAF2-203ENST00000425618 2448 ntTSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 AMFR-201ENST00000290649 3600 ntAPPRIS P2 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 CTTN-203ENST00000376561 2247 ntTSL 1 (best) BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 SLC10A3-204ENST00000393587 1862 ntAPPRIS P3 TSL 2 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 FAM83G-202ENST00000388995 5266 ntAPPRIS P1 TSL 5 BASIC17.78■□□□□ 0.44
TRIM42Q8IWZ5 IMMP2L-202ENST00000405709 1522 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 HECTD1-201ENST00000399332 9134 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 PTCH1-201ENST00000331920 8057 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 DOCK7-203ENST00000404627 2678 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 LUC7L3-201ENST00000240304 1972 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 BTBD1-201ENST00000261721 3297 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 CCDC7-203ENST00000362006 2133 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 ANKRD26P3-201ENST00000454044 2748 ntBASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 CPT2-210ENST00000637252 2739 ntTSL 5 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 POLR2D-202ENST00000409698 806 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AC131097.3-201ENST00000413820 1228 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 RPL29-202ENST00000466397 742 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 ADAMTS19-AS1-201ENST00000502827 786 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AC091551.1-201ENST00000590722 1228 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AP001412.1-201ENST00000608405 714 ntBASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AC116407.2-201ENST00000613639 860 ntBASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 HFE2-201ENST00000336751 2234 ntAPPRIS P1 TSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 CYP2D6-201ENST00000359033 1433 ntTSL 1 (best) BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AL596257.1-201ENST00000641463 2694 ntBASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.77■□□□□ 0.44
TRIM42Q8IWZ5 AES-201ENST00000221561 1884 ntTSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM42Q8IWZ5 RHOT1-201ENST00000333942 3133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM42Q8IWZ5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM42Q8IWZ5 NFIC-211ENST00000641145 8399 ntBASIC17.77■□□□□ 0.43
TRIM42Q8IWZ5 RNF103-201ENST00000237455 3477 ntAPPRIS P1 TSL 1 (best) BASIC17.77■□□□□ 0.43
TRIM42Q8IWZ5 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 CAP2-208ENST00000611958 2686 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 CREB3L1-206ENST00000621158 2687 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 ST3GAL6-214ENST00000483910 1886 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 MEST-202ENST00000341441 2443 ntAPPRIS ALT1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 ITGB2-AS1-202ENST00000441379 2282 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 NPM3-201ENST00000370110 877 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 CCDC74B-204ENST00000409234 871 ntAPPRIS ALT2 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 MOK-228ENST00000523231 1114 ntTSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 REXO2-216ENST00000544196 452 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 AC015712.2-203ENST00000560461 688 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 AC025259.3-201ENST00000564531 542 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 DGCR10-201ENST00000609839 495 ntBASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 BET1L-203ENST00000382762 2819 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 NCOA5-201ENST00000290231 3220 ntAPPRIS P1 TSL 1 (best) BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 GBA2-201ENST00000378088 1672 ntTSL 2 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 TSC2-207ENST00000439673 5287 ntAPPRIS ALT2 TSL 2 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 LBHD1-210ENST00000532208 1508 ntAPPRIS P2 TSL 5 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 AL079303.2-201ENST00000555107 2613 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 MEI1-215ENST00000540833 2326 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 AL512380.2-201ENST00000637901 1780 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 ARHGAP4-204ENST00000393721 2721 ntTSL 5 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 FENDRR-206ENST00000599749 2843 ntTSL 3 BASIC17.76■□□□□ 0.43
TRIM42Q8IWZ5 HPCA-201ENST00000373467 1468 ntAPPRIS P1 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 TTLL10-202ENST00000379289 2259 ntAPPRIS P1 TSL 2 BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 ZNF618-203ENST00000374126 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC17.75■□□□□ 0.43
TRIM42Q8IWZ5 NGFR-202ENST00000504201 1840 ntTSL 2 BASIC17.75■□□□□ 0.43
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms