Protein–RNA interactions for Protein: Q8IV50

LYSMD2, LysM and putative peptidoglycan-binding domain-containing protein 2, humanhuman

Predictions only

Length 215 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD2Q8IV50 AC073111.5-205ENST00000641717 521 ntBASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 ZNF672-201ENST00000306562 2989 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 GPR176-205ENST00000561100 2816 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 NDUFV1-223ENST00000532303 1493 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 FUT7-201ENST00000314412 2584 ntAPPRIS P1 TSL 1 (best) BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 PRAG1-201ENST00000615670 4903 ntAPPRIS P1 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 DCLK2-204ENST00000506325 2298 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 ANTXRL-206ENST00000622632 1964 ntAPPRIS ALT2 TSL 5 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 KCTD11-201ENST00000333751 2783 ntAPPRIS P1 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 GPR137-212ENST00000539851 1843 ntTSL 2 BASIC15.64■□□□□ 0.09
LYSMD2Q8IV50 CAMK2D-201ENST00000296402 5820 ntAPPRIS P3 TSL 5 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 KPNA2-202ENST00000537025 2456 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 PYURF-201ENST00000273968 1361 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 MAP1LC3B-201ENST00000268607 2688 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 PPAN-P2RY11-202ENST00000428358 2661 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AC079328.2-201ENST00000561241 3354 ntBASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 UBE3D-203ENST00000369747 1917 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 ZSWIM8-223ENST00000605216 6004 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 DCXR-201ENST00000306869 887 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 FGF12-AS2-201ENST00000443165 580 ntTSL 4 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 F2R-202ENST00000505600 442 ntTSL 2 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AL049874.3-201ENST00000557618 868 ntTSL 3 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AC138028.5-201ENST00000566114 558 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 ZNF667-AS1-206ENST00000591797 535 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AC022517.1-201ENST00000592429 346 ntBASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 MARK4-211ENST00000622871 1147 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 HLA-J-201ENST00000462773 1622 ntBASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 PLA2G12A-201ENST00000243501 5226 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 TGIF1-201ENST00000330513 1980 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 PABPC4-202ENST00000372857 3048 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 CBARP-204ENST00000590083 4261 ntAPPRIS P2 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 SCFD2-204ENST00000611795 1320 ntTSL 5 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 C16orf71-204ENST00000590191 2564 ntAPPRIS ALT2 TSL 5 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 LRIT1-201ENST00000372105 2228 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 LYPLAL1-202ENST00000366928 1898 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 CSNK2A2-201ENST00000262506 1701 ntAPPRIS P1 TSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 ASCC3-207ENST00000522650 2828 ntTSL 1 (best) BASIC15.63■□□□□ 0.09
LYSMD2Q8IV50 CLDN14-204ENST00000399137 1942 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 MFSD2A-203ENST00000420632 1914 ntTSL 2 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 IMPA1-201ENST00000256108 2690 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 COBL-201ENST00000265136 5291 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 VPS16-203ENST00000380469 2318 ntTSL 2 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 MTFR2-203ENST00000420702 1793 ntAPPRIS P2 TSL 2 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 SLC43A2-204ENST00000571650 3261 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 WDR1-202ENST00000382451 2722 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 CDKN2AIP-203ENST00000504169 2721 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 ZBTB5-201ENST00000307750 4627 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 TJP2-202ENST00000377245 4611 ntAPPRIS P4 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 SARAF-201ENST00000256255 2154 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 DHFR-201ENST00000439211 3917 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 UBXN6-202ENST00000394765 1809 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 EPS8L2-231ENST00000614442 3188 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 TRIL-201ENST00000539664 4935 ntAPPRIS P1 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 DDIT4L-201ENST00000273990 2604 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 INA-201ENST00000369849 3231 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 RHEB-204ENST00000472642 900 ntTSL 3 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 CTBP1-AS2-203ENST00000507044 739 ntTSL 3 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 C1QL1P1-201ENST00000568105 661 ntBASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 AC006435.1-201ENST00000571775 1065 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 AC060766.5-201ENST00000590539 871 ntBASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 AC008687.6-201ENST00000596318 630 ntBASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 PNMA8A-203ENST00000602246 572 ntAPPRIS ALT2 TSL 4 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 INF2-204ENST00000398337 1689 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 NUP50-202ENST00000396096 1895 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 NCAPH2-203ENST00000395701 2077 ntTSL 2 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 VCAN-204ENST00000502527 2087 ntAPPRIS ALT1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 C16orf71-201ENST00000299320 2722 ntAPPRIS P2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 GALNT18-201ENST00000227756 2504 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 NGFR-201ENST00000172229 3417 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 C18orf63-201ENST00000579455 5127 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 TSPAN3-210ENST00000561277 1592 ntTSL 5 BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 CARD14-202ENST00000570421 2607 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC15.62■□□□□ 0.09
LYSMD2Q8IV50 OTX1-201ENST00000282549 2861 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 OTX1-202ENST00000366671 2861 ntAPPRIS P1 TSL 3 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 TEF-201ENST00000266304 4394 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 PLTP-205ENST00000477313 2255 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 ZBTB7C-221ENST00000590800 4947 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC15.61■□□□□ 0.09
LYSMD2Q8IV50 MBP-202ENST00000355994 2772 ntTSL 5 BASIC15.61■□□□□ 0.09
Retrieved 100 of 98,524 protein–RNA pairs in 39.1 ms