Protein–RNA interactions for Protein: Q7Z3V4

UBE3B, Ubiquitin-protein ligase E3B, humanhuman

Predictions only

Length 1,068 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3BQ7Z3V4 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 RUVBL1-202ENST00000464873 2126 ntTSL 2 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 DDX43P3-201ENST00000441064 443 ntBASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 TSPAN4-214ENST00000525201 834 ntTSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 AC069287.3-201ENST00000527297 589 ntTSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 FIBP-212ENST00000533045 1173 ntTSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 AC133919.2-201ENST00000565965 589 ntTSL 4 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 GABARAP-204ENST00000571253 837 ntTSL 2 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 FOXP1-223ENST00000622151 429 ntTSL 3 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 PC-208ENST00000529047 1607 ntTSL 3 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 TFEB-203ENST00000358871 2188 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 EGR3-204ENST00000522910 1553 ntAPPRIS ALT1 TSL 2 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 WSCD1-209ENST00000574232 2129 ntAPPRIS P1 TSL 5 BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 RIN1-201ENST00000311320 2693 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 PMAIP1-202ENST00000316660 1948 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
UBE3BQ7Z3V4 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 KRT18P55-202ENST00000578578 1546 ntBASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 AL445433.2-201ENST00000425113 2544 ntTSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 CLDND1-204ENST00000394185 2159 ntAPPRIS P1 TSL 5 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 ISCA2-201ENST00000298818 851 ntTSL 5 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 CSF3-203ENST00000394148 622 ntTSL 3 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 PLD3-207ENST00000409735 2140 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 PITPNA-AS1-201ENST00000425081 542 ntTSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 NKTR-203ENST00000442970 646 ntTSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 AL589182.1-202ENST00000548416 533 ntTSL 4 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 GRTP1-205ENST00000620217 1073 ntTSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 PTPRE-201ENST00000254667 5331 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 LONRF1-208ENST00000533751 3043 ntTSL 5 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 MIF4GD-204ENST00000577542 1531 ntTSL 3 BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 TCIRG1-213ENST00000532635 2457 ntTSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
UBE3BQ7Z3V4 RNF32-201ENST00000311822 1842 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 CHAC1-202ENST00000446533 1849 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 DLG3-202ENST00000374355 5074 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 FBXL15-201ENST00000224862 2362 ntAPPRIS P2 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 RAB4A-201ENST00000366690 2966 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 MRPL28-201ENST00000199706 1098 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 LAMTOR5-201ENST00000256644 868 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 MSANTD1-201ENST00000438480 2922 ntAPPRIS P3 TSL 5 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 LAMTOR5-204ENST00000483260 694 ntTSL 2 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 AC139887.2-202ENST00000507446 534 ntTSL 4 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 HEXB-207ENST00000511181 2021 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 AP001107.6-201ENST00000526655 516 ntTSL 3 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 TOM1L2-207ENST00000535933 1748 ntTSL 2 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 COX5A-202ENST00000562233 441 ntTSL 3 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 CYGB-205ENST00000590175 830 ntTSL 3 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 AC011530.1-201ENST00000593999 558 ntTSL 2 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 LAMTOR5-206ENST00000602318 634 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 AL022326.1-202ENST00000641533 845 ntBASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 AC107918.4-202ENST00000641623 219 ntBASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 FOLH1-204ENST00000356696 2403 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 BX276092.7-203ENST00000637198 1536 ntBASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 PRRT2-212ENST00000636619 2065 ntTSL 5 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
UBE3BQ7Z3V4 RAP1GAP-204ENST00000374761 3318 ntTSL 5 BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 ENTPD6-201ENST00000354989 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 CACNA1I-204ENST00000407673 5952 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 AATF-208ENST00000619387 2141 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 AC138969.1-205ENST00000381497 1552 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 SIGLEC16-201ENST00000599858 1437 ntBASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 SLC16A5-203ENST00000538213 1842 ntAPPRIS ALT2 TSL 2 BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 RPS2P28-201ENST00000314255 741 ntBASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 OTOS-202ENST00000391989 645 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
UBE3BQ7Z3V4 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 60 ms