Protein–RNA interactions for Protein: Q6ZR62

RTL4, Retrotransposon Gag-like protein 4, humanhuman

Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL4Q6ZR62 USP13-201ENST00000263966 8323 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 TCF7-204ENST00000395029 3330 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 CACNA1G-206ENST00000416767 4899 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 CYP7B1-201ENST00000310193 2202 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 POC1B-GALNT4-201ENST00000547474 2207 ntTSL 2 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 NFATC2-206ENST00000609943 5690 ntAPPRIS ALT2 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 AC138028.4-201ENST00000564984 1845 ntBASIC16.7■□□□□ 0.26
RTL4Q6ZR62 UNC5CL-202ENST00000373164 1620 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 BORCS6-201ENST00000389017 2575 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 CIAO1-203ENST00000488633 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 B3GALNT1-202ENST00000392779 3221 ntAPPRIS P1 TSL 2 BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 ST6GALNAC6-201ENST00000291839 2280 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
RTL4Q6ZR62 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 AC027097.1-202ENST00000592201 1954 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 TEFM-205ENST00000581216 1891 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 AC060780.1-201ENST00000635600 1782 ntTSL 5 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 SLK-202ENST00000369755 7766 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 BEND4-201ENST00000502486 8765 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 ESPNP-201ENST00000270691 2015 ntBASIC16.69■□□□□ 0.26
RTL4Q6ZR62 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 SF1-203ENST00000377387 2947 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 CARHSP1-201ENST00000311052 746 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 DUSP15-203ENST00000375966 1077 ntTSL 3 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 UFD1-202ENST00000399523 1007 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 LENG8-AS1-201ENST00000416022 582 ntTSL 3 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 LEF1-AS1-201ENST00000436413 1045 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 DRAXINP1-201ENST00000437611 948 ntBASIC16.69■□□□□ 0.26
RTL4Q6ZR62 MIR3652-201ENST00000579335 131 ntBASIC16.69■□□□□ 0.26
RTL4Q6ZR62 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.69■□□□□ 0.26
RTL4Q6ZR62 DHRS4L2-211ENST00000621761 1049 ntTSL 5 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 KIF16B-201ENST00000354981 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 RPL32-202ENST00000396953 1734 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 IL17RC-201ENST00000295981 2621 ntAPPRIS P4 TSL 2 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 AC012313.1-201ENST00000593393 3059 ntBASIC16.69■□□□□ 0.26
RTL4Q6ZR62 AC099343.3-201ENST00000605834 2503 ntBASIC16.69■□□□□ 0.26
RTL4Q6ZR62 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 POR-209ENST00000439269 1858 ntTSL 2 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 JMJD7-201ENST00000397299 1416 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 GSDMD-201ENST00000262580 1762 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 ZNF84-201ENST00000327668 7162 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 OLFM2-203ENST00000590841 1665 ntTSL 2 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 CCNI2-201ENST00000378731 2355 ntAPPRIS P3 TSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 POLI-207ENST00000579434 2705 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
RTL4Q6ZR62 GUCA1A-202ENST00000372958 1575 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 CRYL1-202ENST00000382812 1581 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 FAM20A-205ENST00000592554 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 C18orf21-205ENST00000592875 1581 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 KMT2E-207ENST00000476671 2523 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 FAM53A-205ENST00000472884 2086 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 TMEM128-201ENST00000254742 1737 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 RGS3-202ENST00000342620 1714 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 KCNK3-201ENST00000302909 6162 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 PNOC-201ENST00000301908 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 CGB7-201ENST00000377280 918 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 CXCL12-204ENST00000395793 665 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 CST3-202ENST00000398409 832 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 UBE2J2-205ENST00000400930 1021 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 DECR2-202ENST00000424398 1012 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 AC093585.1-201ENST00000425183 428 ntTSL 2 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 AC079385.1-201ENST00000551505 570 ntTSL 4 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 CIB2-208ENST00000560618 804 ntTSL 2 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 TPSP2-201ENST00000561760 610 ntBASIC16.68■□□□□ 0.26
RTL4Q6ZR62 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 ANAPC11-217ENST00000579978 575 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 CLEC4GP1-201ENST00000596555 870 ntBASIC16.68■□□□□ 0.26
RTL4Q6ZR62 TMEM132A-201ENST00000005286 3480 ntAPPRIS P3 TSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 EIPR1-201ENST00000382125 1766 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 PHYKPL-201ENST00000308158 2038 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 RELL2-201ENST00000297164 2520 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 POLR1D-220ENST00000637071 1943 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 NRBP1-204ENST00000379863 2174 ntTSL 5 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 FERMT2-204ENST00000399304 2082 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 PRKRA-203ENST00000432031 1344 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 FNBP1-201ENST00000355681 1977 ntTSL 2 BASIC16.68■□□□□ 0.26
RTL4Q6ZR62 TMEM177-204ENST00000424086 1738 ntAPPRIS P1 TSL 2 BASIC16.67■□□□□ 0.26
RTL4Q6ZR62 IFNLR1-205ENST00000374421 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Retrieved 100 of 98,524 protein–RNA pairs in 43.3 ms