Protein–RNA interactions for Protein: Q5UIP0

RIF1, Telomere-associated protein RIF1, humanhuman

Known RBP Predictions only

Length 2,472 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1Q5UIP0 AC087500.1-202ENST00000571689 1715 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 DPH1-201ENST00000263083 2221 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 AL671277.1-201ENST00000429656 993 ntBASIC17.12■□□□□ 0.33
RIF1Q5UIP0 AC008969.1-205ENST00000553254 876 ntTSL 2 BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 DISC1-213ENST00000537876 2349 ntAPPRIS ALT2 TSL 2 BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 OSR2-209ENST00000522510 1528 ntAPPRIS P1 TSL 2 BASIC17.12■□□□□ 0.33
RIF1Q5UIP0 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 CYB561-213ENST00000581573 2344 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 MECP2-203ENST00000407218 1174 ntTSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 ICAM2-202ENST00000418105 1252 ntAPPRIS P1 TSL 3 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 AC114956.2-201ENST00000512498 572 ntTSL 4 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 ZNF576-206ENST00000533118 867 ntAPPRIS P1 TSL 2 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 RAB43P1-201ENST00000561790 589 ntBASIC17.11■□□□□ 0.33
RIF1Q5UIP0 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 ICAM2-208ENST00000579788 1103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 LGALS9C-215ENST00000584941 1104 ntTSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 GPR182-203ENST00000622922 591 ntBASIC17.11■□□□□ 0.33
RIF1Q5UIP0 FAM3A-201ENST00000322269 1815 ntTSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 DNAJC28-204ENST00000617313 2237 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 RNH1-204ENST00000397614 1864 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 FAM66C-208ENST00000541558 2087 ntTSL 2 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 B9D1-209ENST00000477478 1353 ntTSL 3 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 EXOC3L2-202ENST00000413988 2964 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 SELENOF-208ENST00000616787 1835 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 POLDIP3-202ENST00000339677 783 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 CUTA-202ENST00000374496 762 ntAPPRIS P3 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 BAG1-202ENST00000379704 1128 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 PPP6R2P1-201ENST00000450880 1275 ntBASIC17.11■□□□□ 0.33
RIF1Q5UIP0 TMEM63A-209ENST00000537914 1018 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 AC026150.2-201ENST00000564693 1156 ntBASIC17.11■□□□□ 0.33
RIF1Q5UIP0 SSH2-210ENST00000582084 560 ntTSL 3 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 ACTL9-202ENST00000612068 1252 ntBASIC17.11■□□□□ 0.33
RIF1Q5UIP0 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 NDUFV1-216ENST00000529927 1503 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 R3HDML-201ENST00000217043 1377 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 KIF25-203ENST00000443060 1613 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 KCTD1-202ENST00000408011 2103 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
RIF1Q5UIP0 RAPH1-210ENST00000453034 2394 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 CRB3-203ENST00000598494 1443 ntAPPRIS ALT2 TSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 ZNF579-201ENST00000325421 2899 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 KLF6-204ENST00000469435 2169 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 COQ6-220ENST00000629426 1538 ntTSL 5 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 AMACR-202ENST00000382068 862 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 AC093151.3-201ENST00000425554 623 ntTSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 TMEM205-202ENST00000447337 916 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 AC092552.1-201ENST00000547243 906 ntBASIC17.1■□□□□ 0.33
RIF1Q5UIP0 SDHAF3-202ENST00000432641 2060 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 TMTC1-203ENST00000539277 2758 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 MXRA7-201ENST00000355797 5661 ntAPPRIS P4 TSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 ZNF296-201ENST00000303809 1744 ntAPPRIS P2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 WWOX-203ENST00000406884 1701 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 FCER2-202ENST00000360067 1482 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 CACNA1A-218ENST00000635895 8657 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 CACNA1A-257ENST00000638009 8665 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 MB-201ENST00000359787 1170 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 MB-202ENST00000397326 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 MB-203ENST00000397328 1153 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 LINC01503-203ENST00000436710 901 ntTSL 3 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 S100A2-206ENST00000497140 697 ntTSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 ARL16-202ENST00000570561 768 ntTSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 SIGLEC7-205ENST00000600577 616 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 ADCK5-201ENST00000308860 1949 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 AC132938.6-201ENST00000623828 1655 ntBASIC17.1■□□□□ 0.33
RIF1Q5UIP0 PI4KAP1-204ENST00000612579 1703 ntBASIC17.1■□□□□ 0.33
RIF1Q5UIP0 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 UBTD2-201ENST00000393792 3301 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
RIF1Q5UIP0 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 CRYBA2-201ENST00000295728 893 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 DBNDD2-205ENST00000372717 1207 ntTSL 5 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 DGCR5-201ENST00000399539 862 ntBASIC17.09■□□□□ 0.33
RIF1Q5UIP0 AL512384.1-201ENST00000406683 331 ntBASIC17.09■□□□□ 0.33
RIF1Q5UIP0 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 MIR6787-201ENST00000616675 61 ntBASIC17.09■□□□□ 0.33
RIF1Q5UIP0 NAGPA-AS1-202ENST00000632058 2265 ntTSL 2 BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 SBK1-201ENST00000341901 4992 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
RIF1Q5UIP0 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 48.8 ms