Protein–RNA interactions for Protein: Q5T3J3

LRIF1, Ligand-dependent nuclear receptor-interacting factor 1, humanhuman

Predictions only

Length 769 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1Q5T3J3 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 EN2-201ENST00000297375 3395 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 UNC119-204ENST00000470125 2050 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 NEK3-206ENST00000611833 2345 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 AC133785.1-201ENST00000429282 2824 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 MMP23A-201ENST00000234610 1017 ntBASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 AC005104.2-201ENST00000427818 678 ntBASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 MAP3K13-213ENST00000454237 526 ntTSL 3 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 GCHFR-202ENST00000558467 785 ntTSL 2 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 MOAP1-202ENST00000556883 2529 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 CPEB3-203ENST00000614585 5789 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 DNM1-202ENST00000372923 3244 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 LHX3-203ENST00000619587 2698 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 MFSD11-219ENST00000593181 1922 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 AC016396.2-201ENST00000562575 1417 ntBASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 ZBTB11-202ENST00000461821 2115 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 ARHGEF28-214ENST00000545377 6351 ntAPPRIS P3 TSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 KLHL33-201ENST00000344581 1863 ntTSL 5 BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC16.78■□□□□ 0.28
LRIF1Q5T3J3 ZNF668-201ENST00000300849 2762 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 PFKFB3-215ENST00000536985 2094 ntTSL 2 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 HEG1-201ENST00000311127 9156 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 CHRNB4-202ENST00000412074 1355 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 LTV1-201ENST00000367576 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 LGI4-202ENST00000392225 2891 ntTSL 5 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 ZSCAN10-202ENST00000538082 2350 ntTSL 4 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 CNTRL-208ENST00000373865 1917 ntTSL 5 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 TRAF3IP1-201ENST00000373327 4279 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 ENC1-201ENST00000302351 5520 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 FBXO32-202ENST00000443022 1227 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 MIR4497-201ENST00000583208 89 ntBASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 TEN1-204ENST00000588202 862 ntTSL 3 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 NRXN1-209ENST00000405581 5078 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 ARHGAP9-204ENST00000430041 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 GMDS-AS1-201ENST00000456943 2308 ntTSL 2 BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 LSP1-201ENST00000311604 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
LRIF1Q5T3J3 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 PARD3-201ENST00000340077 3518 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 WWP1-202ENST00000517970 4686 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 CLCN2-205ENST00000457512 2820 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 MEPCE-201ENST00000310512 3030 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 CRELD1-201ENST00000326434 1994 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
LRIF1Q5T3J3 GCH1-204ENST00000491895 2943 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 PSMA1-209ENST00000530457 1527 ntTSL 5 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 ALDH16A1-201ENST00000293350 3153 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 LRRC23-202ENST00000323702 1208 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 INSIG1-202ENST00000342407 1127 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 HMGB3P22-201ENST00000442010 597 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 GXYLT1P4-201ENST00000613576 1192 ntBASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 CADM1-222ENST00000616271 1246 ntTSL 5 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 AP006294.2-201ENST00000641667 209 ntBASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 PTGES2-201ENST00000277462 1614 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 PROC-201ENST00000234071 1773 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 RAB8A-201ENST00000300935 2827 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 MLXIP-201ENST00000319080 8427 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 BATF2-202ENST00000435842 1949 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 AL138752.2-201ENST00000540557 2591 ntAPPRIS P1 TSL 5 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 ATOH1-201ENST00000306011 2212 ntAPPRIS P1 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 EPN2-203ENST00000395618 2216 ntTSL 2 BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 PACSIN2-205ENST00000407585 3080 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
LRIF1Q5T3J3 CTNNAL1-204ENST00000374595 2522 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 PMS1-206ENST00000418224 3018 ntTSL 5 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 CCDC184-201ENST00000316554 2343 ntAPPRIS P1 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 RUNX1-207ENST00000437180 5967 ntAPPRIS P3 TSL 5 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 HAGHL-203ENST00000389703 1347 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 RMDN3-202ENST00000338376 2251 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
LRIF1Q5T3J3 F11R-202ENST00000368026 4835 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms