Protein–RNA interactions for Protein: Q5GLZ8

HERC4, Probable E3 ubiquitin-protein ligase HERC4, humanhuman

Predicted RBP Predictions only

Length 1,057 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4Q5GLZ8 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC4Q5GLZ8 BANP-223ENST00000538234 2372 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC4Q5GLZ8 P2RY6-208ENST00000540124 2351 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
HERC4Q5GLZ8 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC19.89■□□□□ 0.78
HERC4Q5GLZ8 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.78
HERC4Q5GLZ8 GDF7-201ENST00000272224 9749 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
HERC4Q5GLZ8 ARFIP2-201ENST00000254584 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 ALDH4A1-201ENST00000290597 2124 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 TMED3-201ENST00000299705 1475 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 CDK2AP2-201ENST00000301488 1378 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 BAALC-202ENST00000306391 243 ntTSL 5 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 BAALC-204ENST00000330955 222 ntTSL 5 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 PDZD3-202ENST00000355547 2252 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 AJUBA-202ENST00000361265 2569 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 BPGM-202ENST00000393132 2051 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 AC055811.2-201ENST00000427497 1693 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 ACY1-210ENST00000494103 1298 ntTSL 3 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 LINC02237-202ENST00000521904 477 ntTSL 3 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 RBM15B-201ENST00000563281 6641 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 AC011498.5-201ENST00000592027 486 ntBASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
HERC4Q5GLZ8 GSDMD-206ENST00000526406 2496 ntAPPRIS P2 TSL 2 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 DUOXA1-201ENST00000267803 1996 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 MAEA-219ENST00000514708 1945 ntTSL 2 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 PML-205ENST00000395132 1738 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 LRCH1-201ENST00000311191 4710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 ANKRD6-201ENST00000339746 3073 ntAPPRIS ALT1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 PROK2-202ENST00000353065 1549 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 CCDC177-201ENST00000599174 4131 ntAPPRIS P1 TSL 3 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 KRT18P1-202ENST00000452408 1331 ntBASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 RPLP0-219ENST00000551150 1344 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 TSPY19P-201ENST00000418461 509 ntBASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 TSPY18P-201ENST00000441642 509 ntBASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 AP002383.4-201ENST00000442518 975 ntBASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 RBM14-RBM4-203ENST00000500635 829 ntTSL 2 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 AL449423.1-201ENST00000578935 435 ntTSL 3 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 ZNF524-203ENST00000591046 1260 ntAPPRIS P1 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 MUC1-224ENST00000611577 1023 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 IZUMO4-213ENST00000620263 947 ntTSL 3 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 PIANP-204ENST00000540656 2432 ntAPPRIS P3 TSL 2 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 A4GALT-203ENST00000401850 2321 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 TSKS-201ENST00000246801 1883 ntAPPRIS P2 TSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 RIC8A-208ENST00000527696 2565 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
HERC4Q5GLZ8 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 DHRS4L2-203ENST00000534993 1450 ntTSL 3 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 CTSA-204ENST00000372484 2149 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 NME9-203ENST00000383180 2133 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 C3orf18-201ENST00000357203 2655 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 SEMA6C-209ENST00000613223 1950 ntTSL 5 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 GJC3-201ENST00000312891 1116 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 TSPY22P-201ENST00000427496 604 ntBASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 CCDC61-201ENST00000536603 1282 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 GNAS-203ENST00000306120 1878 ntBASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 CXXC5-211ENST00000511048 1892 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 EIF3B-201ENST00000360876 3055 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 OPA3-202ENST00000323060 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 PLEKHB1-203ENST00000398492 2275 ntAPPRIS ALT1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 SLC9A6-208ENST00000636206 4711 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
HERC4Q5GLZ8 BCL11A-209ENST00000489516 1508 ntTSL 5 BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 C6orf141-206ENST00000529246 1450 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 AC008969.1-203ENST00000313957 1897 ntTSL 2 BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 C16orf59-204ENST00000563531 1864 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 PLEKHM2-201ENST00000375793 4004 ntAPPRIS ALT2 TSL 5 BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 APEH-202ENST00000438011 2249 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 MZF1-206ENST00000599369 2587 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 HIST1H2AI-201ENST00000358739 503 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 AC079781.3-201ENST00000449110 356 ntBASIC19.86■□□□□ 0.77
HERC4Q5GLZ8 AC068472.1-201ENST00000474589 881 ntBASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 87.6 ms