Protein–RNA interactions for Protein: Q01581

HMGCS1, Hydroxymethylglutaryl-CoA synthase, cytoplasmic, humanhuman

Predictions only

Length 520 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1Q01581 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 PPIF-201ENST00000225174 2190 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 SUPT20H-203ENST00000360252 2843 ntAPPRIS P3 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 NSFL1C-206ENST00000476071 2800 ntTSL 5 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 ARF1-214ENST00000541182 2006 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 CEBPG-201ENST00000284000 4109 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 ADIRF-AS1-201ENST00000418273 2627 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 KLK14-201ENST00000156499 1060 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 POU4F3-201ENST00000230732 1182 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 BOLA3-202ENST00000327428 639 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 STARP1-201ENST00000397973 869 ntBASIC17.16■□□□□ 0.34
HMGCS1Q01581 RCN1P1-201ENST00000400413 996 ntBASIC17.16■□□□□ 0.34
HMGCS1Q01581 AC117947.1-201ENST00000427448 529 ntBASIC17.16■□□□□ 0.34
HMGCS1Q01581 KRT18P48-201ENST00000434763 852 ntBASIC17.16■□□□□ 0.34
HMGCS1Q01581 SNX5-210ENST00000481323 562 ntTSL 3 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 HELT-202ENST00000505610 846 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 PAX4-204ENST00000463946 1613 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 SGSM2-202ENST00000426855 4734 ntAPPRIS ALT1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 FBF1-205ENST00000586717 4825 ntAPPRIS ALT2 TSL 5 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 NMD3-202ENST00000460469 3061 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 FKBP3-201ENST00000216330 1684 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 WNT8A-204ENST00000506684 1543 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 AC133548.2-201ENST00000568567 2605 ntTSL 1 (best) BASIC17.16■□□□□ 0.34
HMGCS1Q01581 DIABLO-206ENST00000443649 2250 ntAPPRIS P1 TSL 2 BASIC17.16■□□□□ 0.34
HMGCS1Q01581 IL12RB2-202ENST00000371000 2454 ntTSL 2 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 REXO1L11P-201ENST00000620964 1927 ntBASIC17.15■□□□□ 0.34
HMGCS1Q01581 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 AC008105.2-201ENST00000420431 579 ntTSL 4 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 KRT18P57-201ENST00000443599 1254 ntBASIC17.15■□□□□ 0.34
HMGCS1Q01581 APBB3-216ENST00000511201 1014 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 ABHD14B-208ENST00000525795 980 ntAPPRIS P1 TSL 3 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 AC116407.2-201ENST00000613639 860 ntBASIC17.15■□□□□ 0.34
HMGCS1Q01581 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 BDKRB1-201ENST00000216629 1687 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 TYRO3-201ENST00000263798 8207 ntAPPRIS P3 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 LMTK2-201ENST00000297293 8946 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 IMP4-201ENST00000259239 1740 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 METTL21A-203ENST00000411432 4805 ntAPPRIS P1 TSL 2 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 AC026954.2-202ENST00000575474 2571 ntAPPRIS P5 TSL 5 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 SIRPAP1-201ENST00000448467 1770 ntBASIC17.15■□□□□ 0.34
HMGCS1Q01581 NEIL1-221ENST00000569035 1797 ntAPPRIS P1 TSL 1 (best) BASIC17.15■□□□□ 0.34
HMGCS1Q01581 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC17.15■□□□□ 0.34
HMGCS1Q01581 SDK1-202ENST00000404826 10397 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.34
HMGCS1Q01581 AL023806.1-201ENST00000603994 1649 ntBASIC17.14■□□□□ 0.33
HMGCS1Q01581 SLC29A2-206ENST00000546034 2509 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 CROCCP2-202ENST00000412962 2773 ntBASIC17.14■□□□□ 0.33
HMGCS1Q01581 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 ARHGAP22-205ENST00000417912 2352 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 RHOV-201ENST00000220507 1705 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 GLRB-201ENST00000264428 3126 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 METTL5-201ENST00000260953 1010 ntAPPRIS P2 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 TMEM190-201ENST00000291934 593 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 FGF8-202ENST00000344255 707 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 CDC26-201ENST00000374206 872 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 LY6E-214ENST00000522971 857 ntAPPRIS P2 TSL 2 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 TK2-213ENST00000563369 882 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 ELAC2-212ENST00000578071 579 ntTSL 4 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 AC011498.2-201ENST00000588798 540 ntTSL 3 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 SLF2-205ENST00000609386 891 ntAPPRIS ALT2 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 SMIM29-209ENST00000636500 1186 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 SLC7A9-204ENST00000590341 1752 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 PLEKHG6-203ENST00000396988 2963 ntAPPRIS P1 TSL 2 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 NR2E1-202ENST00000368986 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 SPECC1-203ENST00000395525 2536 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 GDF5-202ENST00000374372 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 AGPAT2-201ENST00000371694 1391 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 ZMYM5-202ENST00000382905 1382 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
HMGCS1Q01581 NR1H3-202ENST00000405576 1352 ntTSL 5 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 TRA2A-211ENST00000538367 2142 ntAPPRIS ALT2 TSL 2 BASIC17.14■□□□□ 0.33
HMGCS1Q01581 RSBN1-205ENST00000615321 2418 ntTSL 2 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 A4GALT-202ENST00000381278 1935 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 TLE2-219ENST00000591529 2483 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 EIF4E1B-201ENST00000318682 1974 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
HMGCS1Q01581 TPST2-201ENST00000338754 5697 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 ZBTB44-201ENST00000357899 2781 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 FICD-204ENST00000552695 3347 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
HMGCS1Q01581 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Retrieved 100 of 98,524 protein–RNA pairs in 33.4 ms