Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 AL158151.1-201ENST00000372490 2047 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 GALT-202ENST00000450095 1280 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 AL354710.2-201ENST00000468244 550 ntTSL 4 BASIC10.89□□□□□ -0.67
HSPG2P98160 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 PCMTD1-206ENST00000521344 1712 ntTSL 3 BASIC10.89□□□□□ -0.67
HSPG2P98160 RASL12-201ENST00000220062 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 AL049812.1-201ENST00000432563 2267 ntBASIC10.89□□□□□ -0.67
HSPG2P98160 TMEM145-201ENST00000301204 1768 ntAPPRIS P2 TSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 MBL1P-201ENST00000480805 1424 ntTSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 MIR658-201ENST00000385210 100 ntBASIC10.89□□□□□ -0.67
HSPG2P98160 NUDT1-206ENST00000397049 714 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 LINC00982-205ENST00000420957 435 ntBASIC10.89□□□□□ -0.67
HSPG2P98160 TMEM14B-212ENST00000475942 992 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 AC008378.1-201ENST00000521251 496 ntTSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 MIR4259-201ENST00000584466 101 ntBASIC10.89□□□□□ -0.67
HSPG2P98160 TMED1-207ENST00000591695 809 ntTSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 ZNF550-208ENST00000601415 515 ntTSL 4 BASIC10.89□□□□□ -0.67
HSPG2P98160 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 TEKT2-201ENST00000207457 1509 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 SAAL1-201ENST00000300013 1518 ntAPPRIS ALT1 TSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 DUSP7-202ENST00000495880 3340 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 NPY-203ENST00000407573 705 ntAPPRIS P1 TSL 3 BASIC10.89□□□□□ -0.67
HSPG2P98160 AC124057.1-201ENST00000433035 404 ntTSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC10.89□□□□□ -0.67
HSPG2P98160 MRPL52-216ENST00000557221 922 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 AC026471.2-201ENST00000569782 655 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 AC026120.1-201ENST00000611536 926 ntBASIC10.89□□□□□ -0.67
HSPG2P98160 BSG-214ENST00000614867 960 ntTSL 3 BASIC10.89□□□□□ -0.67
HSPG2P98160 UBAP1L-201ENST00000502113 1381 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 TRIM61-201ENST00000329314 1582 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 TTC12-202ENST00000393020 2541 ntTSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 USP39-201ENST00000323701 2177 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 OTOP2-202ENST00000580223 2086 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 CRYM-AS1-201ENST00000338573 1661 ntTSL 2 BASIC10.89□□□□□ -0.67
HSPG2P98160 TRPM2-208ENST00000621064 1669 ntTSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC10.89□□□□□ -0.67
HSPG2P98160 MRM2-203ENST00000440306 1570 ntAPPRIS P1 TSL 5 BASIC10.89□□□□□ -0.67
HSPG2P98160 LINC01160-202ENST00000450155 894 ntTSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 ATXN2-AS-201ENST00000547021 485 ntTSL 2 BASIC10.88□□□□□ -0.67
HSPG2P98160 CERNA1-201ENST00000559779 908 ntTSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 AC140878.1-201ENST00000565277 250 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 AC009407.1-201ENST00000568958 598 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 ARL16-202ENST00000570561 768 ntTSL 2 BASIC10.88□□□□□ -0.67
HSPG2P98160 TNNT1-209ENST00000587758 1016 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 AL138828.2-201ENST00000615812 383 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC10.88□□□□□ -0.67
HSPG2P98160 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 CPEB2-AS1-201ENST00000500394 1630 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 PRR15-201ENST00000319694 1678 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 GOLGA7-202ENST00000405786 1903 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 DUPD1-201ENST00000338487 663 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 RPS3A-212ENST00000514682 985 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 AP001107.2-202ENST00000528650 480 ntTSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 AC106886.1-201ENST00000568660 600 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 EPDR1-201ENST00000199448 2599 ntAPPRIS P3 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 FAM66B-202ENST00000606573 2630 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 MUTYH-203ENST00000372098 1839 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 MUTYH-204ENST00000372104 1823 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 MUTYH-205ENST00000372110 1809 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 SLC18B1-202ENST00000367918 472 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 TMEM37-202ENST00000409826 794 ntTSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 SNHG17-206ENST00000436764 973 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 RBPMS2P1-201ENST00000437762 623 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 IL32-232ENST00000552356 623 ntAPPRIS ALT2 TSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 TBC1D16-205ENST00000572862 1141 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 SLC25A39-207ENST00000586016 1156 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 AC003101.2-201ENST00000612557 442 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 GPR182-203ENST00000622922 591 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 NKAIN4-202ENST00000370313 1421 ntTSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 TFAP2A-AS1-201ENST00000420777 1575 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 HEY1-208ENST00000523976 1325 ntTSL 2 BASIC10.88□□□□□ -0.67
HSPG2P98160 POLI-202ENST00000406285 2030 ntTSL 2 BASIC10.88□□□□□ -0.67
HSPG2P98160 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC10.88□□□□□ -0.67
HSPG2P98160 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 TEAD1-206ENST00000527636 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 PTGIR-201ENST00000291294 2107 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 OARD1-201ENST00000373154 1129 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 AL606760.1-201ENST00000458151 1181 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 SLC25A6P2-201ENST00000497974 877 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 AC012574.2-201ENST00000520375 443 ntTSL 3 BASIC10.88□□□□□ -0.67
HSPG2P98160 PACS1-203ENST00000524815 628 ntTSL 4 BASIC10.88□□□□□ -0.67
HSPG2P98160 BEST1-205ENST00000526988 1263 ntTSL 2 BASIC10.88□□□□□ -0.67
HSPG2P98160 LINC01220-201ENST00000558575 715 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 RBM14-202ENST00000393979 1426 ntTSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 AC100757.3-201ENST00000622361 1406 ntBASIC10.88□□□□□ -0.67
HSPG2P98160 BCS1L-202ENST00000392109 1583 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 BCS1L-204ENST00000392111 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC10.88□□□□□ -0.67
HSPG2P98160 ZNF296-202ENST00000622376 1631 ntAPPRIS ALT2 TSL 1 (best) BASIC10.88□□□□□ -0.67
HSPG2P98160 GPAT2P1-202ENST00000471661 1569 ntTSL 2 BASIC10.87□□□□□ -0.67
HSPG2P98160 DRAM2-201ENST00000286692 2246 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
HSPG2P98160 LINC02437-201ENST00000505053 911 ntTSL 3 BASIC10.87□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 78.9 ms