Protein–RNA interactions for Protein: P78415

IRX3, Iroquois-class homeodomain protein IRX-3, humanhuman

Predicted RBP Predictions only

Length 501 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX3P78415 ZNF517-202ENST00000525105 1383 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 PSMC3IP-204ENST00000587209 1381 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 GNB2-205ENST00000419828 1285 ntTSL 5 BASIC20.65■□□□□ 0.9
IRX3P78415 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
IRX3P78415 MIR3687-2-201ENST00000577708 61 ntBASIC20.65■□□□□ 0.9
IRX3P78415 AC008105.3-202ENST00000585471 1077 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 AC008687.7-201ENST00000593309 920 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 AC010522.1-205ENST00000598031 606 ntAPPRIS P1 TSL 3 BASIC20.65■□□□□ 0.9
IRX3P78415 AL022328.2-201ENST00000608016 640 ntTSL 3 BASIC20.65■□□□□ 0.9
IRX3P78415 MIR3687-1-201ENST00000614492 61 ntBASIC20.65■□□□□ 0.9
IRX3P78415 AL022326.1-202ENST00000641533 845 ntBASIC20.65■□□□□ 0.9
IRX3P78415 KCNH2-203ENST00000430723 2648 ntTSL 5 BASIC20.65■□□□□ 0.9
IRX3P78415 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 WWOX-214ENST00000566780 2482 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 ZNF419-204ENST00000415379 2186 ntAPPRIS ALT2 TSL 2 BASIC20.65■□□□□ 0.9
IRX3P78415 SDCBP-204ENST00000447182 2103 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 GLS-202ENST00000338435 4475 ntAPPRIS ALT1 TSL 1 (best) BASIC20.65■□□□□ 0.9
IRX3P78415 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC20.65■□□□□ 0.9
IRX3P78415 REEP4-201ENST00000306306 1710 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IRX3P78415 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IRX3P78415 AC132938.6-201ENST00000623828 1655 ntBASIC20.64■□□□□ 0.9
IRX3P78415 HPDL-201ENST00000334815 1629 ntAPPRIS P1 BASIC20.64■□□□□ 0.9
IRX3P78415 AC079776.2-201ENST00000641154 1609 ntBASIC20.64■□□□□ 0.9
IRX3P78415 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.9
IRX3P78415 COLEC11-206ENST00000403096 1557 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IRX3P78415 PSMD8-207ENST00000592035 1581 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
IRX3P78415 GRK2-201ENST00000308595 3466 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
IRX3P78415 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 SEMA6D-205ENST00000389425 2318 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC20.64■□□□□ 0.89
IRX3P78415 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
IRX3P78415 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC20.64■□□□□ 0.89
IRX3P78415 YBX2P1-201ENST00000394192 760 ntBASIC20.64■□□□□ 0.89
IRX3P78415 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 RPSAP43-201ENST00000402237 625 ntBASIC20.64■□□□□ 0.89
IRX3P78415 GNB2-207ENST00000427895 1146 ntTSL 5 BASIC20.64■□□□□ 0.89
IRX3P78415 GPX1P2-201ENST00000429271 606 ntBASIC20.64■□□□□ 0.89
IRX3P78415 AC007967.2-201ENST00000432613 625 ntBASIC20.64■□□□□ 0.89
IRX3P78415 DNAJB3-201ENST00000446806 729 ntBASIC20.64■□□□□ 0.89
IRX3P78415 ANKRD13D-218ENST00000515828 1111 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.89
IRX3P78415 MIR1199-201ENST00000621445 119 ntBASIC20.64■□□□□ 0.89
IRX3P78415 DOK1-201ENST00000233668 2555 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 SHF-201ENST00000290894 2500 ntAPPRIS P3 TSL 2 BASIC20.64■□□□□ 0.89
IRX3P78415 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 CABIN1-202ENST00000337989 2422 ntAPPRIS ALT2 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 HLA-A-203ENST00000376809 1611 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
IRX3P78415 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
IRX3P78415 TMPRSS5-201ENST00000299882 2232 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 TCEAL4-201ENST00000372629 1511 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 OSTM1-201ENST00000193322 4467 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 GPN3-202ENST00000537466 1491 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 CEP78-202ENST00000376597 2618 ntAPPRIS P4 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC20.63■□□□□ 0.89
IRX3P78415 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC20.63■□□□□ 0.89
IRX3P78415 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 GPRC5C-201ENST00000342648 1273 ntTSL 5 BASIC20.63■□□□□ 0.89
IRX3P78415 ZNF295-AS1-202ENST00000429739 783 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 CHMP1A-208ENST00000550102 803 ntTSL 5 BASIC20.63■□□□□ 0.89
IRX3P78415 LINGO1-AS2-201ENST00000557799 663 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 AC005944.1-201ENST00000592758 564 ntTSL 3 BASIC20.63■□□□□ 0.89
IRX3P78415 AC018529.2-201ENST00000612024 828 ntTSL 4 BASIC20.63■□□□□ 0.89
IRX3P78415 GSEC-201ENST00000626810 2289 ntTSL 2 BASIC20.63■□□□□ 0.89
IRX3P78415 TFAP4-201ENST00000204517 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 SERPINE2-206ENST00000447280 1716 ntTSL 2 BASIC20.63■□□□□ 0.89
IRX3P78415 PYCR1-217ENST00000629768 1740 ntTSL 5 BASIC20.63■□□□□ 0.89
IRX3P78415 LRRC43-201ENST00000339777 2028 ntAPPRIS P2 TSL 5 BASIC20.63■□□□□ 0.89
IRX3P78415 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC20.63■□□□□ 0.89
IRX3P78415 ADCY6-206ENST00000550422 5877 ntTSL 2 BASIC20.63■□□□□ 0.89
IRX3P78415 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC20.63■□□□□ 0.89
IRX3P78415 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
IRX3P78415 ICA1-201ENST00000265577 2309 ntAPPRIS ALT1 TSL 5 BASIC20.62■□□□□ 0.89
IRX3P78415 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 AP003717.1-202ENST00000537019 1412 ntTSL 5 BASIC20.62■□□□□ 0.89
IRX3P78415 TMC5-203ENST00000396229 4917 ntAPPRIS ALT2 TSL 5 BASIC20.62■□□□□ 0.89
IRX3P78415 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 GOSR2-201ENST00000225567 1245 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 BEX3-201ENST00000361298 921 ntTSL 2 BASIC20.62■□□□□ 0.89
IRX3P78415 RPA2-202ENST00000373909 1162 ntTSL 3 BASIC20.62■□□□□ 0.89
IRX3P78415 RFX3-AS1-201ENST00000423112 552 ntTSL 3 BASIC20.62■□□□□ 0.89
IRX3P78415 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC20.62■□□□□ 0.89
IRX3P78415 NXNL2-205ENST00000618633 739 ntTSL 5 BASIC20.62■□□□□ 0.89
IRX3P78415 CENPT-208ENST00000562787 2345 ntAPPRIS P2 TSL 2 BASIC20.62■□□□□ 0.89
IRX3P78415 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 DTX2-206ENST00000430490 2623 ntAPPRIS P3 TSL 1 (best) BASIC20.62■□□□□ 0.89
IRX3P78415 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC20.62■□□□□ 0.89
Retrieved 100 of 98,524 protein–RNA pairs in 34.6 ms