Protein–RNA interactions for Protein: P62995

TRA2B, Transformer-2 protein homolog beta, humanhuman

Known RBP Predictions only

Length 288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2BP62995 RDH5-202ENST00000547072 1054 ntTSL 5 BASIC16.78■□□□□ 0.28
TRA2BP62995 LAT-211ENST00000566177 786 ntAPPRIS ALT2 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 AC010463.1-201ENST00000596542 1207 ntAPPRIS P1 TSL 2 BASIC16.78■□□□□ 0.28
TRA2BP62995 AC116407.4-201ENST00000623319 1061 ntBASIC16.78■□□□□ 0.28
TRA2BP62995 CHEK2-202ENST00000348295 1771 ntTSL 5 BASIC16.78■□□□□ 0.28
TRA2BP62995 DYRK1B-203ENST00000430012 2007 ntAPPRIS ALT1 TSL 5 BASIC16.78■□□□□ 0.28
TRA2BP62995 TTLL8-201ENST00000266182 2505 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.28
TRA2BP62995 B3GNT2-201ENST00000301998 2763 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 LGI3-201ENST00000306317 3272 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 RUSC1-214ENST00000490373 1700 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 OPRD1-201ENST00000234961 9345 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 STK10-201ENST00000176763 6060 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 CLK2-202ENST00000361168 1934 ntAPPRIS P3 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.78■□□□□ 0.28
TRA2BP62995 OR6D1P-202ENST00000641007 5290 ntBASIC16.78■□□□□ 0.28
TRA2BP62995 PSENEN-202ENST00000587708 1661 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 CDK10-208ENST00000505473 1424 ntTSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 LINC01097-201ENST00000627163 2122 ntTSL 2 BASIC16.78■□□□□ 0.28
TRA2BP62995 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC16.78■□□□□ 0.28
TRA2BP62995 RBBP7-203ENST00000380087 2333 ntAPPRIS P1 TSL 1 (best) BASIC16.78■□□□□ 0.28
TRA2BP62995 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC16.77■□□□□ 0.28
TRA2BP62995 RCAN3-209ENST00000616511 2527 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 JAKMIP1-202ENST00000409021 2975 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC16.77■□□□□ 0.28
TRA2BP62995 SYNM-204ENST00000594047 6407 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 NRG2-205ENST00000361474 3020 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 OXT-201ENST00000217386 513 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 FXN-203ENST00000396366 922 ntTSL 2 BASIC16.77■□□□□ 0.28
TRA2BP62995 AC002558.1-201ENST00000488906 803 ntBASIC16.77■□□□□ 0.28
TRA2BP62995 PACRGL-218ENST00000507634 1142 ntTSL 5 BASIC16.77■□□□□ 0.28
TRA2BP62995 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 TSFM-208ENST00000543727 651 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 AL161669.1-201ENST00000559843 386 ntTSL 3 BASIC16.77■□□□□ 0.28
TRA2BP62995 C6orf106-202ENST00000374023 4418 ntAPPRIS P4 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 SLC22A18AS-203ENST00000625099 1659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.77■□□□□ 0.28
TRA2BP62995 YIF1B-204ENST00000392124 1404 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 AC125634.1-201ENST00000438758 1403 ntBASIC16.77■□□□□ 0.27
TRA2BP62995 IL34-201ENST00000288098 1607 ntAPPRIS P2 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC16.77■□□□□ 0.27
TRA2BP62995 LYPLA2-205ENST00000374514 1810 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 MSC-201ENST00000325509 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 FLOT2-202ENST00000394908 2618 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 SHTN1-203ENST00000392901 2190 ntAPPRIS ALT2 TSL 2 BASIC16.77■□□□□ 0.27
TRA2BP62995 BEST2-202ENST00000549706 2183 ntAPPRIS P1 TSL 5 BASIC16.77■□□□□ 0.27
TRA2BP62995 UQCRC1-201ENST00000203407 1985 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 GAL3ST1-201ENST00000338911 1782 ntAPPRIS P1 TSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 C14orf93-204ENST00000397377 1776 ntTSL 1 (best) BASIC16.77■□□□□ 0.27
TRA2BP62995 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC16.77■□□□□ 0.27
TRA2BP62995 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 WNT5B-202ENST00000397196 2303 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 SPC24-206ENST00000592540 2315 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 USF2-202ENST00000343550 1523 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 TEX264-204ENST00000415259 2290 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TRA2BP62995 LRRD1-201ENST00000343318 2073 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 PCDHA8-201ENST00000378123 2616 ntAPPRIS ALT2 BASIC16.76■□□□□ 0.27
TRA2BP62995 ABCC3-202ENST00000427699 1881 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 PDLIM7-202ENST00000355841 1689 ntAPPRIS P4 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 GGN-201ENST00000334928 2239 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 PCGF6-202ENST00000369847 2230 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 BET1L-202ENST00000332865 533 ntTSL 5 BASIC16.76■□□□□ 0.27
TRA2BP62995 PON3-205ENST00000451904 1053 ntTSL 3 BASIC16.76■□□□□ 0.27
TRA2BP62995 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 VENTXP7-201ENST00000475503 772 ntBASIC16.76■□□□□ 0.27
TRA2BP62995 AC140504.1-202ENST00000568222 652 ntTSL 5 BASIC16.76■□□□□ 0.27
TRA2BP62995 AC087388.1-201ENST00000571370 1112 ntBASIC16.76■□□□□ 0.27
TRA2BP62995 KCNE1B-204ENST00000623803 811 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.76■□□□□ 0.27
TRA2BP62995 ADM-208ENST00000534464 1640 ntTSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 P2RY6-209ENST00000540342 1611 ntAPPRIS P1 TSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 HSF2-201ENST00000368455 2549 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 ARHGEF18-201ENST00000319670 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 CLEC10A-204ENST00000571664 1442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 GPSM2-201ENST00000264126 3032 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 PGRMC1-202ENST00000535419 1762 ntTSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 PIP5K1A-207ENST00000441902 2297 ntTSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 DTX3-204ENST00000548804 2067 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
TRA2BP62995 ACP2-206ENST00000529444 1719 ntTSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 RDH8-203ENST00000591589 1715 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
TRA2BP62995 CXXC1P1-201ENST00000483225 1897 ntTSL 2 BASIC16.76■□□□□ 0.27
TRA2BP62995 NSMAF-202ENST00000427130 3371 ntTSL 2 BASIC16.75■□□□□ 0.27
TRA2BP62995 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRA2BP62995 LRRC61-201ENST00000323078 1684 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRA2BP62995 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRA2BP62995 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
TRA2BP62995 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC16.75■□□□□ 0.27
TRA2BP62995 PEX16-201ENST00000241041 1479 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
TRA2BP62995 PPP1R9B-202ENST00000612501 4167 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms