Protein–RNA interactions for Protein: P58304

VSX2, Visual system homeobox 2, humanhuman

Predicted RBP Predictions only

Length 361 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VSX2P58304 IRF5-214ENST00000613821 595 ntTSL 5 BASIC17.04■□□□□ 0.32
VSX2P58304 SLC22A1-201ENST00000324965 1521 ntTSL 5 BASIC17.04■□□□□ 0.32
VSX2P58304 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 TCP11-201ENST00000244645 2018 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
VSX2P58304 TP73-AS1-210ENST00000637775 1455 ntBASIC17.04■□□□□ 0.32
VSX2P58304 AC100803.2-201ENST00000562459 1963 ntBASIC17.04■□□□□ 0.32
VSX2P58304 DCST1-204ENST00000423025 2199 ntAPPRIS ALT2 TSL 2 BASIC17.04■□□□□ 0.32
VSX2P58304 ZYG11A-203ENST00000612017 3682 ntTSL 5 BASIC17.03■□□□□ 0.32
VSX2P58304 SH3BP5-203ENST00000408919 1880 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.03■□□□□ 0.32
VSX2P58304 FMR1-205ENST00000370475 4308 ntAPPRIS P3 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 PPM1G-201ENST00000344034 2311 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC17.03■□□□□ 0.32
VSX2P58304 TBC1D3P5-201ENST00000579401 1545 ntBASIC17.03■□□□□ 0.32
VSX2P58304 IL6R-202ENST00000368485 5914 ntAPPRIS P4 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 CCDC134-201ENST00000255784 1270 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 PRMT2-201ENST00000291705 1011 ntTSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 EDN3-203ENST00000371025 1153 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 MEF2B-202ENST00000409447 1297 ntTSL 3 BASIC17.03■□□□□ 0.32
VSX2P58304 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC17.03■□□□□ 0.32
VSX2P58304 POM121L3P-201ENST00000419331 1163 ntBASIC17.03■□□□□ 0.32
VSX2P58304 KRT16P4-201ENST00000453883 522 ntBASIC17.03■□□□□ 0.32
VSX2P58304 AC064807.1-201ENST00000518942 816 ntTSL 3 BASIC17.03■□□□□ 0.32
VSX2P58304 AC009533.2-201ENST00000543664 586 ntBASIC17.03■□□□□ 0.32
VSX2P58304 AC111152.3-201ENST00000569699 673 ntBASIC17.03■□□□□ 0.32
VSX2P58304 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC17.03■□□□□ 0.32
VSX2P58304 SYNGR2-202ENST00000585591 949 ntAPPRIS P1 TSL 5 BASIC17.03■□□□□ 0.32
VSX2P58304 TBCB-205ENST00000585746 875 ntTSL 3 BASIC17.03■□□□□ 0.32
VSX2P58304 AC008735.1-201ENST00000592252 802 ntTSL 5 BASIC17.03■□□□□ 0.32
VSX2P58304 LINC01711-201ENST00000598340 967 ntBASIC17.03■□□□□ 0.32
VSX2P58304 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC17.03■□□□□ 0.32
VSX2P58304 IFNL4P1-201ENST00000607083 540 ntBASIC17.03■□□□□ 0.32
VSX2P58304 TCP11-228ENST00000611141 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 GFI1B-208ENST00000636263 1604 ntTSL 5 BASIC17.03■□□□□ 0.32
VSX2P58304 PSRC1-205ENST00000409138 1826 ntTSL 2 BASIC17.03■□□□□ 0.32
VSX2P58304 AC138028.4-201ENST00000564984 1845 ntBASIC17.03■□□□□ 0.32
VSX2P58304 C8orf58-207ENST00000615223 1848 ntAPPRIS ALT2 TSL 5 BASIC17.03■□□□□ 0.32
VSX2P58304 KCNA7-201ENST00000221444 4372 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 SLC39A5-201ENST00000266980 2031 ntAPPRIS P1 TSL 1 (best) BASIC17.03■□□□□ 0.32
VSX2P58304 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 NAA35-201ENST00000361671 2649 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 HSD11B1L-223ENST00000616276 1580 ntAPPRIS ALT2 TSL 5 BASIC17.02■□□□□ 0.32
VSX2P58304 TSPAN32-201ENST00000182290 1318 ntAPPRIS P2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 TSPAN32-217ENST00000612299 1301 ntTSL 5 BASIC17.02■□□□□ 0.32
VSX2P58304 FLJ13224-201ENST00000313737 1514 ntBASIC17.02■□□□□ 0.32
VSX2P58304 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.02■□□□□ 0.32
VSX2P58304 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 MRC2-201ENST00000303375 5988 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 FAM111A-204ENST00000528737 6189 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.32
VSX2P58304 AL354751.1-201ENST00000412768 1863 ntBASIC17.02■□□□□ 0.32
VSX2P58304 ID2-202ENST00000331129 623 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 PDLIM4-202ENST00000379018 1006 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 SEC61G-203ENST00000415949 732 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.32
VSX2P58304 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 UNC93B7-201ENST00000509439 705 ntBASIC17.02■□□□□ 0.32
VSX2P58304 AP003555.3-201ENST00000534086 432 ntTSL 4 BASIC17.02■□□□□ 0.32
VSX2P58304 AL691432.3-201ENST00000621860 400 ntBASIC17.02■□□□□ 0.32
VSX2P58304 VASH1-201ENST00000167106 5728 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.32
VSX2P58304 ATRIP-203ENST00000357105 2403 ntTSL 2 BASIC17.02■□□□□ 0.32
VSX2P58304 SLC22A7-201ENST00000372574 1822 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSX2P58304 DMKN-213ENST00000447113 1611 ntAPPRIS ALT2 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSX2P58304 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSX2P58304 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC17.02■□□□□ 0.31
VSX2P58304 GALNT14-202ENST00000349752 2733 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSX2P58304 ZNF865-201ENST00000568956 4005 ntAPPRIS P1 TSL 2 BASIC17.02■□□□□ 0.31
VSX2P58304 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSX2P58304 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC17.02■□□□□ 0.31
VSX2P58304 PLBD2-201ENST00000280800 4800 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.31
VSX2P58304 CLDN6-202ENST00000396925 1739 ntAPPRIS P1 TSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 PRRT2-219ENST00000637565 1733 ntTSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 EIF2AK3-201ENST00000303236 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 DDX51-202ENST00000397333 4718 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 PML-211ENST00000564428 1985 ntAPPRIS ALT2 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 BTNL9-202ENST00000376841 1626 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 MRPL10-203ENST00000414011 1622 ntTSL 3 BASIC17.01■□□□□ 0.31
VSX2P58304 DSCR9-201ENST00000454482 1644 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 TPM1-203ENST00000317516 738 ntTSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 RCN1P2-201ENST00000398357 915 ntBASIC17.01■□□□□ 0.31
VSX2P58304 HDAC11-204ENST00000404040 967 ntTSL 3 BASIC17.01■□□□□ 0.31
VSX2P58304 KRTCAP3-202ENST00000407293 942 ntTSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC17.01■□□□□ 0.31
VSX2P58304 THAP5-204ENST00000438865 868 ntTSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 AL611929.1-201ENST00000457340 449 ntTSL 3 BASIC17.01■□□□□ 0.31
VSX2P58304 TPM1-218ENST00000559281 851 ntTSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 AC087289.1-201ENST00000586808 890 ntTSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 SSBP1-215ENST00000612337 884 ntAPPRIS P1 TSL 2 BASIC17.01■□□□□ 0.31
VSX2P58304 AC114341.1-201ENST00000618070 349 ntBASIC17.01■□□□□ 0.31
VSX2P58304 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC17.01■□□□□ 0.31
VSX2P58304 MAPK8IP3-201ENST00000250894 5661 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC17.01■□□□□ 0.31
VSX2P58304 CHRFAM7A-202ENST00000397827 2794 ntTSL 5 BASIC17.01■□□□□ 0.31
Retrieved 100 of 98,524 protein–RNA pairs in 25.8 ms