Protein–RNA interactions for Protein: P56645

PER3, Period circadian protein homolog 3, humanhuman

Predictions only

Length 1,201 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PER3P56645 NFATC4-220ENST00000555393 2235 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 EGFL6-202ENST00000380602 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 LINC01168-201ENST00000461291 5254 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 SIT1-201ENST00000259608 1231 ntAPPRIS P2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 PRSS38-201ENST00000366757 1267 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 MIR574-201ENST00000385209 96 ntBASIC16.49■□□□□ 0.23
PER3P56645 MSRB1-202ENST00000399753 847 ntTSL 3 BASIC16.49■□□□□ 0.23
PER3P56645 NUS1P2-201ENST00000417358 873 ntBASIC16.49■□□□□ 0.23
PER3P56645 UBXN10-AS1-201ENST00000442226 510 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 MINOS1P3-201ENST00000457048 203 ntBASIC16.49■□□□□ 0.23
PER3P56645 AF186996.4-201ENST00000467186 377 ntBASIC16.49■□□□□ 0.23
PER3P56645 RSRC1-211ENST00000480820 1410 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 EDNRA-206ENST00000511804 1569 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 MMP17-206ENST00000535291 2301 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 AC092865.5-201ENST00000545435 363 ntBASIC16.49■□□□□ 0.23
PER3P56645 AC092338.2-202ENST00000567158 611 ntTSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 AC008481.3-201ENST00000585656 727 ntAPPRIS P1 TSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 AC011270.2-201ENST00000624293 2550 ntBASIC16.49■□□□□ 0.23
PER3P56645 ETNK2-203ENST00000367202 2434 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 ITGAV-202ENST00000374907 6903 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 SETMAR-206ENST00000430981 1671 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 CARHSP1-219ENST00000618335 2972 ntAPPRIS P1 TSL 4 BASIC16.49■□□□□ 0.23
PER3P56645 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC16.49■□□□□ 0.23
PER3P56645 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
PER3P56645 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC16.49■□□□□ 0.23
PER3P56645 PRELID3A-209ENST00000592149 2001 ntTSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 FAM213B-202ENST00000378425 2665 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 SLC35F5-201ENST00000245680 4412 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 RTN4-204ENST00000357732 2390 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 TFF3-201ENST00000291525 407 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 SPIN2B-202ENST00000333933 1258 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 BOLA1-201ENST00000369150 811 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 RWDD3-202ENST00000370202 1235 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 FAM220CP-201ENST00000395253 831 ntBASIC16.48■□□□□ 0.23
PER3P56645 TSPY12P-201ENST00000421279 868 ntBASIC16.48■□□□□ 0.23
PER3P56645 MMP24-AS1-201ENST00000424358 867 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 MMP24-AS1-209ENST00000456790 712 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 POLR2M-203ENST00000464277 910 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 ABR-204ENST00000543210 1049 ntTSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 ATP5G2-204ENST00000549164 745 ntAPPRIS P1 TSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 RNPS1-222ENST00000567147 830 ntTSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 SYNGR4-204ENST00000601610 859 ntTSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 ATP5G2-209ENST00000602871 668 ntAPPRIS P1 TSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 LINC01197-204ENST00000611265 956 ntTSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 AL592071.1-201ENST00000611956 408 ntBASIC16.48■□□□□ 0.23
PER3P56645 NME4-212ENST00000621774 904 ntTSL 3 BASIC16.48■□□□□ 0.23
PER3P56645 PTPN11-207ENST00000639857 801 ntTSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 NMRK1-203ENST00000376811 2050 ntTSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 NUP50-AS1-201ENST00000426282 2076 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 EXD3-201ENST00000340951 2872 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 ASPM-201ENST00000294732 6132 ntTSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 EMB-204ENST00000508934 1617 ntAPPRIS ALT2 TSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 CALHM2-201ENST00000260743 1859 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC16.48■□□□□ 0.23
PER3P56645 PDLIM2-206ENST00000409141 1463 ntTSL 2 BASIC16.48■□□□□ 0.23
PER3P56645 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC16.48■□□□□ 0.23
PER3P56645 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 WFDC1-203ENST00000568638 1319 ntAPPRIS P1 TSL 2 BASIC16.47■□□□□ 0.23
PER3P56645 CHTOP-207ENST00000614256 1840 ntTSL 3 BASIC16.47■□□□□ 0.23
PER3P56645 HYAL1-204ENST00000395144 2081 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC16.47■□□□□ 0.23
PER3P56645 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 EML3-216ENST00000529309 2909 ntTSL 2 BASIC16.47■□□□□ 0.23
PER3P56645 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC16.47■□□□□ 0.23
PER3P56645 RASSF8-AS1-202ENST00000500276 2610 ntTSL 2 BASIC16.47■□□□□ 0.23
PER3P56645 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.47■□□□□ 0.23
PER3P56645 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 TSPY2-201ENST00000320701 1161 ntAPPRIS P5 TSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 ADGRG2-208ENST00000379873 4698 ntTSL 1 (best) BASIC16.47■□□□□ 0.23
PER3P56645 C2orf82-202ENST00000409230 663 ntAPPRIS P2 TSL 3 BASIC16.47■□□□□ 0.23
PER3P56645 IGHV3-47-201ENST00000425060 335 ntBASIC16.47■□□□□ 0.23
PER3P56645 TSPY2-203ENST00000429039 779 ntAPPRIS ALT2 TSL 2 BASIC16.47■□□□□ 0.23
PER3P56645 NDUFB2-209ENST00000472695 503 ntTSL 5 BASIC16.47■□□□□ 0.23
PER3P56645 ABR-217ENST00000572441 563 ntTSL 4 BASIC16.47■□□□□ 0.23
PER3P56645 MIR3180-4-201ENST00000582223 153 ntBASIC16.47■□□□□ 0.23
Retrieved 100 of 98,524 protein–RNA pairs in 32.9 ms