Protein–RNA interactions for Protein: P54764

EPHA4, Ephrin type-A receptor 4, humanhuman

Predictions only

Length 986 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4P54764 LITAF-215ENST00000574763 717 ntAPPRIS P1 TSL 3 BASIC17.1■□□□□ 0.33
EPHA4P54764 NKAPP1-205ENST00000585790 367 ntBASIC17.1■□□□□ 0.33
EPHA4P54764 FUT6-212ENST00000592563 1095 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 GPX4-212ENST00000616066 924 ntAPPRIS ALT1 TSL 5 BASIC17.1■□□□□ 0.33
EPHA4P54764 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC17.1■□□□□ 0.33
EPHA4P54764 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 C16orf70-208ENST00000569600 1353 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 C11orf68-203ENST00000530188 1528 ntAPPRIS ALT2 BASIC17.1■□□□□ 0.33
EPHA4P54764 ARHGAP26-201ENST00000274498 6862 ntAPPRIS P3 TSL 1 (best) BASIC17.1■□□□□ 0.33
EPHA4P54764 CDCP2-202ENST00000530059 1623 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
EPHA4P54764 FLYWCH1P1-201ENST00000460917 1874 ntBASIC17.1■□□□□ 0.33
EPHA4P54764 A4GALT-201ENST00000249005 2020 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 AC135776.1-201ENST00000319817 2481 ntBASIC17.09■□□□□ 0.33
EPHA4P54764 EPB41L2-211ENST00000525271 2568 ntTSL 2 BASIC17.09■□□□□ 0.33
EPHA4P54764 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 ODF3B-202ENST00000401779 869 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 ODF3B-203ENST00000403326 643 ntTSL 3 BASIC17.09■□□□□ 0.33
EPHA4P54764 ODF3B-205ENST00000428989 762 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 DDX43P3-201ENST00000441064 443 ntBASIC17.09■□□□□ 0.33
EPHA4P54764 OR7E14P-202ENST00000530490 1290 ntBASIC17.09■□□□□ 0.33
EPHA4P54764 BLOC1S6-214ENST00000567461 1052 ntTSL 2 BASIC17.09■□□□□ 0.33
EPHA4P54764 PRSS8-206ENST00000568261 1214 ntTSL 2 BASIC17.09■□□□□ 0.33
EPHA4P54764 PAM16-208ENST00000573553 722 ntTSL 2 BASIC17.09■□□□□ 0.33
EPHA4P54764 AC025062.2-201ENST00000605477 670 ntBASIC17.09■□□□□ 0.33
EPHA4P54764 AC132872.3-201ENST00000620937 629 ntTSL 5 BASIC17.09■□□□□ 0.33
EPHA4P54764 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC17.09■□□□□ 0.33
EPHA4P54764 NPAS4-204ENST00000639555 878 ntTSL 5 BASIC17.09■□□□□ 0.33
EPHA4P54764 TSPY4-205ENST00000640033 663 ntAPPRIS ALT2 TSL 5 BASIC17.09■□□□□ 0.33
EPHA4P54764 AC243591.1-201ENST00000452967 1364 ntBASIC17.09■□□□□ 0.33
EPHA4P54764 SIGLEC16-201ENST00000599858 1437 ntBASIC17.09■□□□□ 0.33
EPHA4P54764 ILDR1-203ENST00000393631 1456 ntTSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 FAM50B-201ENST00000380272 1628 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 TRIM63-201ENST00000374272 1770 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 SIGLEC6-203ENST00000359982 1811 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
EPHA4P54764 NCCRP1-201ENST00000339852 1978 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 TCTEX1D1-201ENST00000282670 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC17.09■□□□□ 0.33
EPHA4P54764 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 FLYWCH1-201ENST00000253928 5037 ntAPPRIS ALT2 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 NUAK1-201ENST00000261402 6828 ntAPPRIS P1 TSL 1 (best) BASIC17.09■□□□□ 0.33
EPHA4P54764 IQSEC2-218ENST00000640694 5958 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
EPHA4P54764 SHANK3-203ENST00000445220 5175 ntAPPRIS ALT2 TSL 5 BASIC17.08■□□□□ 0.33
EPHA4P54764 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA4P54764 NGLY1-207ENST00000428257 2534 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA4P54764 AC069544.2-201ENST00000640019 2528 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA4P54764 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA4P54764 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA4P54764 FAM213A-206ENST00000615554 2213 ntAPPRIS P1 TSL 5 BASIC17.08■□□□□ 0.33
EPHA4P54764 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
EPHA4P54764 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.33
EPHA4P54764 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC17.08■□□□□ 0.33
EPHA4P54764 ADM-208ENST00000534464 1640 ntTSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 SH2D2A-201ENST00000368198 1599 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 STARD7-AS1-202ENST00000446816 1527 ntTSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 NABP2-201ENST00000267023 1417 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 MOV10L1-203ENST00000395852 1422 ntTSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 FAM99B-201ENST00000382166 1067 ntTSL 5 BASIC17.08■□□□□ 0.32
EPHA4P54764 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC17.08■□□□□ 0.32
EPHA4P54764 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 AC010226.1-202ENST00000508517 539 ntTSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 AC004801.5-202ENST00000546804 530 ntTSL 4 BASIC17.08■□□□□ 0.32
EPHA4P54764 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 MTDHP4-201ENST00000600287 670 ntBASIC17.08■□□□□ 0.32
EPHA4P54764 HOXA11-AS1_5.1-201ENST00000620211 203 ntBASIC17.08■□□□□ 0.32
EPHA4P54764 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 AL022326.1-202ENST00000641533 845 ntBASIC17.08■□□□□ 0.32
EPHA4P54764 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 KBTBD11-201ENST00000320248 6710 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 VAV1-204ENST00000596764 2775 ntTSL 2 BASIC17.08■□□□□ 0.32
EPHA4P54764 EIF3J-201ENST00000261868 2569 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 TPD52L1-202ENST00000368388 2147 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 SOD2-206ENST00000452684 2045 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.32
EPHA4P54764 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC17.07■□□□□ 0.32
EPHA4P54764 CBWD1-202ENST00000356521 1706 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 HLA-J-201ENST00000462773 1622 ntBASIC17.07■□□□□ 0.32
EPHA4P54764 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC17.07■□□□□ 0.32
EPHA4P54764 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 ARFIP2-203ENST00000423813 1430 ntTSL 2 BASIC17.07■□□□□ 0.32
EPHA4P54764 DNAH14-205ENST00000366850 1103 ntTSL 5 BASIC17.07■□□□□ 0.32
EPHA4P54764 SYS1-202ENST00000372727 813 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
EPHA4P54764 PMS2P1-201ENST00000431037 1228 ntBASIC17.07■□□□□ 0.32
EPHA4P54764 RPS2P1-201ENST00000434010 821 ntBASIC17.07■□□□□ 0.32
EPHA4P54764 AC016999.1-201ENST00000447880 452 ntTSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 AC099669.1-201ENST00000457331 456 ntTSL 3 BASIC17.07■□□□□ 0.32
EPHA4P54764 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.07■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms