Protein–RNA interactions for Protein: P53384

NUBP1, Cytosolic Fe-S cluster assembly factor NUBP1, humanhuman

Predictions only

Length 320 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NUBP1P53384 GRTP1-AS1-201ENST00000419199 867 ntTSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 FLG-AS1-204ENST00000420707 906 ntTSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 AL390879.2-204ENST00000438602 582 ntTSL 3 BASIC17.66■□□□□ 0.42
NUBP1P53384 AC004865.2-202ENST00000444348 852 ntTSL 3 BASIC17.66■□□□□ 0.42
NUBP1P53384 FAM72B-205ENST00000471903 676 ntTSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 CXCL1P1-201ENST00000502804 216 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 AC025265.3-201ENST00000550175 468 ntTSL 3 BASIC17.66■□□□□ 0.42
NUBP1P53384 MEG8-217ENST00000556637 924 ntTSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 IGHV3OR16-6-201ENST00000568775 360 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 AC083964.1-201ENST00000607549 630 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 BSG-214ENST00000614867 960 ntTSL 3 BASIC17.66■□□□□ 0.42
NUBP1P53384 LINC00623-204ENST00000617702 746 ntTSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 ATP6AP2-220ENST00000636970 1187 ntAPPRIS ALT2 TSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 GABARAPL3-202ENST00000624044 1851 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 SEMA6C-210ENST00000621728 1918 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC17.66■□□□□ 0.42
NUBP1P53384 PEX13-204ENST00000444100 1533 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 SYT7-201ENST00000263846 4854 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 NDUFV1-201ENST00000322776 1596 ntAPPRIS P3 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 AC242426.3-201ENST00000440377 1571 ntTSL 2 BASIC17.66■□□□□ 0.42
NUBP1P53384 MYLKP1-201ENST00000509077 1580 ntBASIC17.66■□□□□ 0.42
NUBP1P53384 YIPF2-204ENST00000586748 1550 ntAPPRIS P1 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 ASAP2-202ENST00000315273 5582 ntAPPRIS ALT2 TSL 1 (best) BASIC17.66■□□□□ 0.42
NUBP1P53384 CAP2-202ENST00000378990 1812 ntTSL 2 BASIC17.65■□□□□ 0.42
NUBP1P53384 AC125494.1-203ENST00000396799 1622 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 TBPL1-208ENST00000613034 1625 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NUBP1P53384 CYP4F8-210ENST00000612078 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 SGTA-201ENST00000221566 2330 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 MYO1C-203ENST00000438665 4898 ntAPPRIS ALT1 TSL 5 BASIC17.65■□□□□ 0.42
NUBP1P53384 OLFM1-204ENST00000371793 2444 ntAPPRIS P1 TSL 3 BASIC17.65■□□□□ 0.42
NUBP1P53384 AC003669.1-201ENST00000334569 611 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 AC073283.1-201ENST00000421759 860 ntTSL 3 BASIC17.65■□□□□ 0.42
NUBP1P53384 TTC31-205ENST00000442235 958 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 LINC00473-201ENST00000444465 798 ntTSL 3 BASIC17.65■□□□□ 0.42
NUBP1P53384 H2AFV-207ENST00000446531 1041 ntTSL 2 BASIC17.65■□□□□ 0.42
NUBP1P53384 AC022784.5-201ENST00000522241 437 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 TSFM-210ENST00000550559 897 ntTSL 5 BASIC17.65■□□□□ 0.42
NUBP1P53384 AC140878.1-201ENST00000565277 250 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 AL158211.1-201ENST00000566763 763 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 IFT20-206ENST00000578122 834 ntTSL 2 BASIC17.65■□□□□ 0.42
NUBP1P53384 KLK6-204ENST00000594641 842 ntAPPRIS P1 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 AC084782.3-201ENST00000612282 578 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 AC090506.2-201ENST00000624521 419 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 AP5S1-201ENST00000246041 1960 ntAPPRIS P1 TSL 4 BASIC17.65■□□□□ 0.42
NUBP1P53384 SIRT6-203ENST00000594279 1507 ntTSL 3 BASIC17.65■□□□□ 0.42
NUBP1P53384 AC141586.3-201ENST00000562166 1838 ntBASIC17.65■□□□□ 0.42
NUBP1P53384 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.65■□□□□ 0.42
NUBP1P53384 SCLT1-204ENST00000503215 1364 ntAPPRIS ALT2 TSL 1 (best) BASIC17.65■□□□□ 0.42
NUBP1P53384 LOXL1-AS1-210ENST00000567257 2358 ntTSL 2 BASIC17.65■□□□□ 0.42
NUBP1P53384 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC17.65■□□□□ 0.42
NUBP1P53384 MDM2-209ENST00000393412 1404 ntTSL 5 BASIC17.64■□□□□ 0.42
NUBP1P53384 KIF25-AS1-201ENST00000414364 1420 ntTSL 2 BASIC17.64■□□□□ 0.42
NUBP1P53384 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.64■□□□□ 0.41
NUBP1P53384 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 MIXL1-201ENST00000366810 2005 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 GNS-207ENST00000542058 2020 ntAPPRIS ALT2 TSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 ZNF316-201ENST00000382252 5392 ntAPPRIS P1 TSL 5 BASIC17.64■□□□□ 0.41
NUBP1P53384 CCDC185-201ENST00000366875 2054 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NUBP1P53384 TMEM82-201ENST00000375782 1520 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 ZMAT3-203ENST00000432729 2944 ntAPPRIS ALT1 TSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 FDXR-205ENST00000544854 1827 ntTSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 CRYGB-201ENST00000260988 641 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 PPIB-201ENST00000300026 1081 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 PQLC2L-201ENST00000312275 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 MUC1-201ENST00000337604 859 ntAPPRIS P3 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 RNU6-673P-201ENST00000365084 104 ntBASIC17.64■□□□□ 0.41
NUBP1P53384 C1orf43-203ENST00000368516 872 ntTSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 SELENOH-201ENST00000388857 833 ntAPPRIS P2 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 COX5BP2-201ENST00000392354 334 ntBASIC17.64■□□□□ 0.41
NUBP1P53384 YDJC-202ENST00000398873 1066 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 AC005237.2-201ENST00000434368 219 ntBASIC17.64■□□□□ 0.41
NUBP1P53384 ATP5G2P4-201ENST00000442175 420 ntBASIC17.64■□□□□ 0.41
NUBP1P53384 MTND2P39-201ENST00000457230 764 ntBASIC17.64■□□□□ 0.41
NUBP1P53384 ADAM3A-209ENST00000497806 1245 ntTSL 5 BASIC17.64■□□□□ 0.41
NUBP1P53384 VASH2-211ENST00000517399 1068 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 AZIN1-AS1-212ENST00000520538 476 ntTSL 3 BASIC17.64■□□□□ 0.41
NUBP1P53384 ETFRF1-202ENST00000553788 708 ntTSL 3 BASIC17.64■□□□□ 0.41
NUBP1P53384 ZNF667-AS1-202ENST00000586091 678 ntTSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 GPR42-202ENST00000597214 1182 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NUBP1P53384 TBX18-206ENST00000606784 1230 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 DMD-208ENST00000378680 1858 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 EGLN2-202ENST00000406058 2150 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NUBP1P53384 FOXS1-201ENST00000375978 1319 ntAPPRIS P1 BASIC17.64■□□□□ 0.41
NUBP1P53384 TMEM86B-201ENST00000327042 1637 ntAPPRIS P1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 SLC38A11-202ENST00000409058 1647 ntAPPRIS ALT2 TSL 5 BASIC17.64■□□□□ 0.41
NUBP1P53384 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC17.64■□□□□ 0.41
NUBP1P53384 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 VGLL4-211ENST00000430365 1377 ntAPPRIS P1 TSL 2 BASIC17.64■□□□□ 0.41
NUBP1P53384 LIMS2-207ENST00000409808 2315 ntAPPRIS ALT1 TSL 5 BASIC17.64■□□□□ 0.41
NUBP1P53384 AC243965.2-201ENST00000612576 2671 ntTSL 5 BASIC17.64■□□□□ 0.41
Retrieved 100 of 98,524 protein–RNA pairs in 35.4 ms