Protein–RNA interactions for Protein: P49643

PRIM2, DNA primase large subunit, humanhuman

Predictions only

Length 509 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRIM2P49643 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC16.96■□□□□ 0.3
PRIM2P49643 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC16.96■□□□□ 0.3
PRIM2P49643 TJP3-201ENST00000539908 2897 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PRIM2P49643 MAP6-202ENST00000434603 4329 ntAPPRIS ALT2 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 LRRC20-203ENST00000358141 2924 ntTSL 2 BASIC16.95■□□□□ 0.3
PRIM2P49643 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 FST-202ENST00000396947 2538 ntTSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 ZFC3H1-211ENST00000552037 1484 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 ETNK2-202ENST00000367201 2431 ntAPPRIS ALT2 TSL 2 BASIC16.95■□□□□ 0.3
PRIM2P49643 CISD2-201ENST00000273986 2327 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC16.95■□□□□ 0.3
PRIM2P49643 ERI1-203ENST00000519292 2107 ntAPPRIS P1 TSL 2 BASIC16.95■□□□□ 0.3
PRIM2P49643 CD81-212ENST00000526072 1172 ntTSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 AC034238.1-212ENST00000596137 723 ntTSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 CENPS-CORT-205ENST00000602787 571 ntAPPRIS P1 TSL 3 BASIC16.95■□□□□ 0.3
PRIM2P49643 LINC01023-201ENST00000606054 436 ntBASIC16.95■□□□□ 0.3
PRIM2P49643 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC16.95■□□□□ 0.3
PRIM2P49643 PRKAR1B-204ENST00000406797 2553 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 ELN-202ENST00000320399 2274 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 TSPAN17-201ENST00000298564 2810 ntTSL 2 BASIC16.95■□□□□ 0.3
PRIM2P49643 CHTOP-203ENST00000368690 2165 ntAPPRIS ALT1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 KCNN2-208ENST00000631899 2098 ntAPPRIS ALT2 TSL 5 BASIC16.95■□□□□ 0.3
PRIM2P49643 PLCB1-203ENST00000378641 7323 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 KLC2-201ENST00000316924 2990 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 FKBP3-202ENST00000396062 1346 ntAPPRIS P1 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 GNAL-202ENST00000334049 6535 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 MIB2-219ENST00000505820 3305 ntAPPRIS P3 TSL 1 (best) BASIC16.95■□□□□ 0.3
PRIM2P49643 SIRPAP1-201ENST00000448467 1770 ntBASIC16.94■□□□□ 0.3
PRIM2P49643 SCHIP1-205ENST00000482804 1799 ntTSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 NUMBL-207ENST00000598779 2249 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 ZNF48-206ENST00000622647 2695 ntTSL 4 BASIC16.94■□□□□ 0.3
PRIM2P49643 KRT13-201ENST00000246635 1699 ntAPPRIS P4 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 SMARCD3-202ENST00000356800 1669 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 TIMM8A-201ENST00000372902 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 UVSSA-209ENST00000512728 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 ARFRP1-207ENST00000612157 1698 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 TBL3-205ENST00000568546 6803 ntAPPRIS P2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 AC005498.3-201ENST00000596587 2045 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 MAST3-201ENST00000262811 5896 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 KCNA2-201ENST00000316361 2827 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PRIM2P49643 FAM50B-202ENST00000380274 1932 ntAPPRIS P1 BASIC16.94■□□□□ 0.3
PRIM2P49643 SBF2-AS1-201ENST00000498905 2709 ntTSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 SCARB1-208ENST00000544327 1812 ntTSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 C18orf8-201ENST00000269221 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 ZDHHC20-201ENST00000320220 1351 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 MBNL1-201ENST00000282486 6422 ntAPPRIS P4 TSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 PSRC1-203ENST00000369907 1717 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 ECE2-205ENST00000404464 3229 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 HES7-201ENST00000317814 678 ntAPPRIS P3 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 C20orf166-AS1-202ENST00000436101 761 ntTSL 5 BASIC16.94■□□□□ 0.3
PRIM2P49643 BX664615.1-201ENST00000443558 458 ntBASIC16.94■□□□□ 0.3
PRIM2P49643 FIS1-207ENST00000474120 915 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 LINC00599-204ENST00000521242 716 ntTSL 3 BASIC16.94■□□□□ 0.3
PRIM2P49643 DYNLL1-205ENST00000548342 662 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PRIM2P49643 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC16.94■□□□□ 0.3
PRIM2P49643 MXD1-201ENST00000264444 5587 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 CBS-201ENST00000352178 2583 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 ZNF667-AS1-201ENST00000585445 1521 ntTSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 SUZ12-201ENST00000322652 4491 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 NARF-204ENST00000390006 1766 ntTSL 2 BASIC16.94■□□□□ 0.3
PRIM2P49643 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC16.94■□□□□ 0.3
PRIM2P49643 ZIC4-212ENST00000484399 1774 ntAPPRIS P1 TSL 2 BASIC16.94■□□□□ 0.3
PRIM2P49643 RNPS1-219ENST00000566397 1685 ntTSL 2 BASIC16.94■□□□□ 0.3
PRIM2P49643 PHRF1-201ENST00000264555 5523 ntAPPRIS ALT2 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 VARS-215ENST00000375663 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.3
PRIM2P49643 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 THAP3-203ENST00000377627 2053 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 SDCBP-202ENST00000413219 2086 ntAPPRIS P3 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 ZNF302-201ENST00000423823 2590 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 KSR1-201ENST00000268763 2806 ntAPPRIS ALT2 TSL 5 BASIC16.93■□□□□ 0.3
PRIM2P49643 UBE2Q2-201ENST00000267938 3130 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 DOC2A-209ENST00000564979 1630 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 WDR18-202ENST00000585809 1608 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 HNRNPU-205ENST00000444376 6827 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 STARD10-218ENST00000543304 1513 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 FKBP10-201ENST00000321562 2662 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC16.93■□□□□ 0.3
PRIM2P49643 TSPY8-203ENST00000383005 435 ntTSL 5 BASIC16.93■□□□□ 0.3
PRIM2P49643 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 ENDOV-202ENST00000517295 908 ntTSL 3 BASIC16.93■□□□□ 0.3
PRIM2P49643 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC16.93■□□□□ 0.3
PRIM2P49643 NDUFS3-213ENST00000534716 1263 ntTSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 LY6L-201ENST00000562505 988 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
PRIM2P49643 FAM104A-205ENST00000581110 512 ntTSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 FMR1-AS1_2.1-201ENST00000613724 127 ntBASIC16.93■□□□□ 0.3
PRIM2P49643 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.93■□□□□ 0.3
PRIM2P49643 SLC22A11-202ENST00000377581 1975 ntTSL 5 BASIC16.93■□□□□ 0.3
PRIM2P49643 AL096870.2-201ENST00000565988 2108 ntTSL 1 (best) BASIC16.93■□□□□ 0.3
PRIM2P49643 HIC2-201ENST00000407464 6798 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms