Protein–RNA interactions for Protein: P49427

CDC34, Ubiquitin-conjugating enzyme E2 R1, humanhuman

Predicted RBP Predictions only

Length 236 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDC34P49427 AC007743.1-203ENST00000447423 1623 ntTSL 2 BASIC14.08□□□□□ -0.15
CDC34P49427 FGFR3-208ENST00000481110 4217 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
CDC34P49427 RRM2B-201ENST00000251810 4931 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
CDC34P49427 MAPK8IP1-202ENST00000395629 3180 ntTSL 5 BASIC14.08□□□□□ -0.15
CDC34P49427 ZNF18-204ENST00000580306 2330 ntAPPRIS P3 TSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC34P49427 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 CLDN7-203ENST00000538261 1923 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC34P49427 SPATA20-202ENST00000356488 2634 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 PCDHGA12-202ENST00000613314 2634 ntAPPRIS ALT2 BASIC14.08□□□□□ -0.16
CDC34P49427 AK4-202ENST00000395334 6998 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 TCP10L2-202ENST00000366832 2185 ntAPPRIS P2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 RABL2A-204ENST00000393167 2179 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 PACRGL-203ENST00000444671 1720 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 CTNNAL1-202ENST00000374593 761 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC34P49427 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 AC079305.3-201ENST00000455416 218 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC34P49427 LINC01881-205ENST00000456398 1235 ntTSL 5 BASIC14.08□□□□□ -0.16
CDC34P49427 PDCD10-202ENST00000461494 934 ntAPPRIS P1 TSL 3 BASIC14.08□□□□□ -0.16
CDC34P49427 BAALC-AS1-207ENST00000522856 594 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC34P49427 AC127496.6-201ENST00000576215 338 ntTSL 3 BASIC14.08□□□□□ -0.16
CDC34P49427 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 C17orf62-238ENST00000585064 1074 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 AC022517.1-201ENST00000592429 346 ntBASIC14.08□□□□□ -0.16
CDC34P49427 COL17A1-202ENST00000369733 5488 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
CDC34P49427 NAGPA-201ENST00000312251 2202 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 FYTTD1-205ENST00000424384 1758 ntTSL 2 BASIC14.08□□□□□ -0.16
CDC34P49427 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 PODXL-201ENST00000322985 2011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 FCGRT-202ENST00000426395 1559 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 SLC29A1-208ENST00000393844 2326 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 ATRNL1-201ENST00000355044 8479 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 ZNF786-201ENST00000316286 3144 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 RNF31-201ENST00000324103 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 SIPA1-201ENST00000394224 3628 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 LAT-203ENST00000395456 1616 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
CDC34P49427 SLC52A1-202ENST00000424747 2412 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 TOM1L1-204ENST00000570371 2442 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 AFTPH-202ENST00000238856 4040 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 AQP1-204ENST00000441328 2487 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 NT5DC3-201ENST00000392876 7207 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 CELF6-201ENST00000287202 3345 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 NFS1-202ENST00000374085 2645 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 ALG3-201ENST00000397676 1528 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 BACE1-211ENST00000528053 4083 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 ARHGEF28-201ENST00000296794 5246 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 AP2S1-201ENST00000263270 935 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 SYCE1L-201ENST00000378644 858 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 AL162430.1-201ENST00000480705 870 ntBASIC14.07□□□□□ -0.16
CDC34P49427 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 AC008622.2-201ENST00000617006 1229 ntBASIC14.07□□□□□ -0.16
CDC34P49427 INO80E-214ENST00000620599 515 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 PFKL-212ENST00000628044 129 ntTSL 3 BASIC14.07□□□□□ -0.16
CDC34P49427 PSMD12-202ENST00000357146 2437 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 KATNAL2-208ENST00000592005 1348 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 VPS37C-201ENST00000301765 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 ITPR3-201ENST00000374316 9870 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 TSSC4-201ENST00000333256 1686 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 KDM4B-203ENST00000536461 5027 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 NTRK2-205ENST00000376208 8178 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 TPPP-201ENST00000360578 6022 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 MYEOV-203ENST00000535407 2306 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
CDC34P49427 GLG1-201ENST00000205061 8261 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 PTGER3-209ENST00000460330 1447 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
CDC34P49427 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC14.07□□□□□ -0.16
CDC34P49427 AC004951.4-201ENST00000454572 2076 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 ZMYND11-214ENST00000509513 2065 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 GJB3-201ENST00000373362 1797 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 CDK8-201ENST00000381527 3055 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 CHST10-201ENST00000264249 2842 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 SLC29A2-202ENST00000357440 2514 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 POLR3E-203ENST00000418581 2529 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 CYP51A1P1-201ENST00000492267 1507 ntBASIC14.06□□□□□ -0.16
CDC34P49427 NIPA2-201ENST00000337451 3233 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDC34P49427 AL365277.1-202ENST00000331856 2241 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 GRIN2C-202ENST00000347612 2929 ntAPPRIS ALT2 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC14.06□□□□□ -0.16
CDC34P49427 LINC01126-201ENST00000623515 1646 ntBASIC14.06□□□□□ -0.16
CDC34P49427 PRSS16-201ENST00000230582 2716 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 NIFKP9-201ENST00000419265 221 ntBASIC14.06□□□□□ -0.16
CDC34P49427 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC14.06□□□□□ -0.16
CDC34P49427 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 GUSBP6-202ENST00000438529 1198 ntBASIC14.06□□□□□ -0.16
CDC34P49427 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC14.06□□□□□ -0.16
CDC34P49427 SBF2-AS1-202ENST00000499953 854 ntTSL 5 BASIC14.06□□□□□ -0.16
CDC34P49427 CFL1-211ENST00000531407 1062 ntTSL 2 BASIC14.06□□□□□ -0.16
CDC34P49427 C11orf24-209ENST00000533310 980 ntAPPRIS ALT2 TSL 5 BASIC14.06□□□□□ -0.16
CDC34P49427 C17orf49-202ENST00000546495 996 ntAPPRIS ALT1 TSL 2 BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 43.4 ms