Protein–RNA interactions for Protein: P48664

SLC1A6, Excitatory amino acid transporter 4, humanhuman

Predictions only

Length 564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A6P48664 TVP23C-204ENST00000438826 1852 ntAPPRIS ALT1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC1A6P48664 CD99P1-205ENST00000527459 561 ntBASIC17.51■□□□□ 0.39
SLC1A6P48664 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A6P48664 BX088651.1-201ENST00000540551 451 ntBASIC17.51■□□□□ 0.39
SLC1A6P48664 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A6P48664 CBLN3-202ENST00000555436 718 ntTSL 3 BASIC17.51■□□□□ 0.39
SLC1A6P48664 AC008687.5-201ENST00000593746 558 ntBASIC17.51■□□□□ 0.39
SLC1A6P48664 TNIP1-220ENST00000610535 2726 ntTSL 5 BASIC17.51■□□□□ 0.39
SLC1A6P48664 LINC00200-201ENST00000425630 2434 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 TBC1D2B-201ENST00000300584 6067 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A6P48664 PLPP4-202ENST00000398250 1521 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A6P48664 ARL6IP6-201ENST00000326446 2805 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 ILF3-203ENST00000449870 6119 ntAPPRIS ALT2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 JHDM1D-AS1-201ENST00000566699 2380 ntBASIC17.51■□□□□ 0.39
SLC1A6P48664 DYNC1I1-212ENST00000630942 2249 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A6P48664 USP2-202ENST00000455332 2903 ntTSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A6P48664 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC17.51■□□□□ 0.39
SLC1A6P48664 AC105001.2-201ENST00000554914 1753 ntAPPRIS P1 TSL 2 BASIC17.51■□□□□ 0.39
SLC1A6P48664 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 HRASLS5-206ENST00000540857 3032 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 PNCK-203ENST00000370145 1455 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 RTL8B-201ENST00000391440 2026 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SLC1A6P48664 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC1A6P48664 SEPHS2-201ENST00000478753 2551 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SLC1A6P48664 KLHDC7B-201ENST00000395676 2991 ntAPPRIS P1 BASIC17.5■□□□□ 0.39
SLC1A6P48664 RAB15-203ENST00000533601 3515 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 PRPF31-203ENST00000419967 2269 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC1A6P48664 ZDHHC8-202ENST00000334554 5046 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 INPP4A-204ENST00000409540 3231 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 MAP4K1-201ENST00000396857 2653 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC1A6P48664 TRABD2A-202ENST00000409133 1554 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 WASF1-202ENST00000359451 3075 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 AC074389.1-201ENST00000382528 1423 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 TRPM4-213ENST00000599628 1829 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 SLC25A23-202ENST00000301454 3425 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 KRT18P29-201ENST00000397031 1267 ntBASIC17.5■□□□□ 0.39
SLC1A6P48664 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC17.5■□□□□ 0.39
SLC1A6P48664 RNF144A-AS1-204ENST00000437589 618 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 CCR12P-201ENST00000446203 998 ntBASIC17.5■□□□□ 0.39
SLC1A6P48664 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 C7orf49-209ENST00000483029 596 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 PENK-204ENST00000518770 863 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC1A6P48664 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC17.5■□□□□ 0.39
SLC1A6P48664 JOSD2-204ENST00000598418 996 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 AP001412.1-201ENST00000608405 714 ntBASIC17.5■□□□□ 0.39
SLC1A6P48664 CDK4-201ENST00000257904 2076 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 KRT79-201ENST00000330553 2068 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 ATP6AP2-224ENST00000637327 1929 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 LINC00634-201ENST00000381348 1510 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 OSBP2-211ENST00000446658 2836 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A6P48664 PACS2-202ENST00000430725 2944 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 MAPRE1-201ENST00000375571 2623 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A6P48664 MAEA-202ENST00000303400 2222 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 GRB7-201ENST00000309156 2243 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 HGS-201ENST00000329138 2970 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC17.49■□□□□ 0.39
SLC1A6P48664 ELOVL7-205ENST00000508821 3994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 RBFOX1-222ENST00000585867 1580 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A6P48664 OSR2-201ENST00000297565 1838 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 TBXAS1-206ENST00000425687 2080 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 RXRB-201ENST00000374680 2908 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 CLEC18C-201ENST00000314151 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 CLEC18A-208ENST00000568461 1934 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 AC027796.3-201ENST00000572919 4753 ntAPPRIS P1 TSL 5 BASIC17.49■□□□□ 0.39
SLC1A6P48664 PTX4-201ENST00000293922 1422 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 NRXN2-202ENST00000301894 3535 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A6P48664 TBC1D28-201ENST00000345096 2789 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A6P48664 SPAG6-202ENST00000376603 2770 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 LGALS12-205ENST00000425950 1789 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 INSIG1-203ENST00000344756 2623 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A6P48664 UBALD1-205ENST00000590891 2641 ntBASIC17.49■□□□□ 0.39
SLC1A6P48664 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 POMC-202ENST00000380794 1295 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A6P48664 MIEF2-202ENST00000395703 718 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A6P48664 CLDN15-202ENST00000401528 2131 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A6P48664 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A6P48664 CHAT-201ENST00000337653 2458 ntAPPRIS P4 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 SPRYD7-202ENST00000378195 3086 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A6P48664 UBE2E1-202ENST00000346855 1398 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A6P48664 EWSAT1-206ENST00000558922 1725 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A6P48664 ETV4-211ENST00000591713 1727 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 DHRS7B-206ENST00000579303 1479 ntAPPRIS ALT1 TSL 5 BASIC17.49■□□□□ 0.39
SLC1A6P48664 LRPPRC-203ENST00000409946 1848 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 SPIDR-227ENST00000541342 3311 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A6P48664 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 VAC14-201ENST00000261776 3099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A6P48664 SEPT9-236ENST00000591088 1691 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A6P48664 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A6P48664 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A6P48664 DKC1-201ENST00000369550 2577 ntAPPRIS P3 TSL 1 (best) BASIC17.48■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 64.3 ms