Protein–RNA interactions for Protein: P46736

BRCC3, Lys-63-specific deubiquitinase BRCC36, humanhuman

Predictions only

Length 316 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3P46736 DLGAP1-222ENST00000639615 1898 ntTSL 5 BASIC18.88■□□□□ 0.61
BRCC3P46736 ADAD1-203ENST00000388725 1918 ntTSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 CYP4F2-201ENST00000011989 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
BRCC3P46736 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC18.88■□□□□ 0.61
BRCC3P46736 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 ATPIF1-201ENST00000335514 494 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 UXT-202ENST00000335890 701 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 VMO1-202ENST00000354194 651 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.87■□□□□ 0.61
BRCC3P46736 SLC2A8-202ENST00000373360 1937 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 C6orf48-203ENST00000375638 847 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BRCC3P46736 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BRCC3P46736 RPS9-203ENST00000391752 772 ntAPPRIS P1 TSL 2 BASIC18.87■□□□□ 0.61
BRCC3P46736 SEPT2-208ENST00000407971 3267 ntTSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 SPDYE21P-201ENST00000413323 827 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 AC098831.1-202ENST00000438821 336 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 ABCB8-211ENST00000477092 1596 ntTSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 HADHB-208ENST00000537713 2142 ntTSL 2 BASIC18.87■□□□□ 0.61
BRCC3P46736 GSTZ1-207ENST00000553586 979 ntAPPRIS ALT1 TSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 AP002414.3-201ENST00000589352 1468 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 CYGB-205ENST00000590175 830 ntTSL 3 BASIC18.87■□□□□ 0.61
BRCC3P46736 ZNF446-203ENST00000594369 2238 ntAPPRIS P2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 AL353593.2-201ENST00000602529 1483 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 AC019129.2-201ENST00000609837 1235 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 TLX2-204ENST00000621092 1452 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 MYO19-225ENST00000621344 1640 ntTSL 2 BASIC18.87■□□□□ 0.61
BRCC3P46736 AC008735.5-201ENST00000623544 497 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 AC073592.4-201ENST00000623827 446 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 SPDYE5-203ENST00000625065 1700 ntAPPRIS P2 TSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 AL022326.1-202ENST00000641533 845 ntBASIC18.87■□□□□ 0.61
BRCC3P46736 FAM83H-201ENST00000388913 5654 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC18.87■□□□□ 0.61
BRCC3P46736 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
BRCC3P46736 TBL1Y-203ENST00000383032 2407 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 NRSN2-202ENST00000382291 2088 ntAPPRIS P1 TSL 2 BASIC18.86■□□□□ 0.61
BRCC3P46736 AC132938.5-201ENST00000624980 1813 ntBASIC18.86■□□□□ 0.61
BRCC3P46736 NFKBID-210ENST00000606253 1736 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 CSF3-202ENST00000331769 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 ATG3-201ENST00000283290 1570 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 LINC00271-201ENST00000421378 1580 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRCC3P46736 HMGN1-204ENST00000380749 1383 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 RBPMS-203ENST00000339877 1341 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 ARPC4-201ENST00000397261 2582 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 TMEM42-201ENST00000302392 1026 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 SUV39H2-202ENST00000354919 1233 ntAPPRIS ALT2 TSL 5 BASIC18.86■□□□□ 0.61
BRCC3P46736 GUCA2A-201ENST00000357001 569 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 SZT2-202ENST00000372450 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 IGHV3-15-201ENST00000390603 437 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BRCC3P46736 TFPT-203ENST00000391759 1205 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCC3P46736 IGHV3-22-201ENST00000520721 359 ntBASIC18.86■□□□□ 0.61
BRCC3P46736 MSRA-206ENST00000521209 814 ntTSL 3 BASIC18.86■□□□□ 0.61
BRCC3P46736 EEF1D-238ENST00000531621 840 ntTSL 3 BASIC18.86■□□□□ 0.61
BRCC3P46736 AL049869.3-201ENST00000554918 558 ntTSL 3 BASIC18.86■□□□□ 0.61
BRCC3P46736 COX5A-202ENST00000562233 441 ntTSL 3 BASIC18.86■□□□□ 0.61
BRCC3P46736 FAM71E1-202ENST00000595790 1225 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 AC116407.2-201ENST00000613639 860 ntBASIC18.86■□□□□ 0.61
BRCC3P46736 AC023511.2-201ENST00000618803 211 ntBASIC18.86■□□□□ 0.61
BRCC3P46736 LRRC23-215ENST00000622489 1061 ntTSL 5 BASIC18.86■□□□□ 0.61
BRCC3P46736 GTF3C5-202ENST00000372097 2406 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 TREX2-201ENST00000330912 2262 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 MARVELD3-202ENST00000299952 2214 ntAPPRIS ALT2 TSL 2 BASIC18.86■□□□□ 0.61
BRCC3P46736 LINC00683-201ENST00000578803 2221 ntTSL 2 BASIC18.86■□□□□ 0.61
BRCC3P46736 CMTM3-201ENST00000361909 2159 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 DUS1L-201ENST00000306796 2068 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC18.86■□□□□ 0.61
BRCC3P46736 ORC5-201ENST00000297431 1958 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 NOM1-201ENST00000275820 6077 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
BRCC3P46736 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 SEC22C-202ENST00000273156 1608 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 PC-208ENST00000529047 1607 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCC3P46736 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 ZSWIM8-220ENST00000604524 5465 ntTSL 5 BASIC18.85■□□□□ 0.61
BRCC3P46736 GGT3P-201ENST00000412448 2340 ntTSL 2 BASIC18.85■□□□□ 0.61
BRCC3P46736 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.85■□□□□ 0.61
BRCC3P46736 LTBP3-202ENST00000322147 4046 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 PDLIM3-201ENST00000284767 2589 ntTSL 5 BASIC18.85■□□□□ 0.61
BRCC3P46736 UBE2J2-204ENST00000400929 1057 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCC3P46736 ESR1-204ENST00000406599 1251 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 RPL13P5-203ENST00000421824 845 ntTSL 3 BASIC18.85■□□□□ 0.61
BRCC3P46736 AL359915.2-201ENST00000425884 745 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 ARAP1-AS1-201ENST00000542022 388 ntTSL 5 BASIC18.85■□□□□ 0.61
BRCC3P46736 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.85■□□□□ 0.61
BRCC3P46736 AC109462.3-201ENST00000573934 613 ntBASIC18.85■□□□□ 0.61
BRCC3P46736 NKIRAS1-207ENST00000437230 1898 ntAPPRIS ALT1 TSL 5 BASIC18.85■□□□□ 0.61
BRCC3P46736 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC18.85■□□□□ 0.61
BRCC3P46736 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms