Protein–RNA interactions for Protein: P40939

HADHA, Trifunctional enzyme subunit alpha, mitochondrial, humanhuman

Predictions only

Length 763 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HADHAP40939 CYP2D6-204ENST00000389970 1714 ntTSL 5 BASIC18.03■□□□□ 0.48
HADHAP40939 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 CLDN5-202ENST00000406028 2548 ntTSL 2 BASIC18.03■□□□□ 0.48
HADHAP40939 METTL5-207ENST00000410097 1370 ntTSL 2 BASIC18.03■□□□□ 0.48
HADHAP40939 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 CEP83-AS1-201ENST00000623122 2482 ntBASIC18.03■□□□□ 0.48
HADHAP40939 RNF2-201ENST00000367509 1677 ntTSL 2 BASIC18.03■□□□□ 0.48
HADHAP40939 FAM72C-201ENST00000369175 1658 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 FAM72B-207ENST00000619376 1659 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
HADHAP40939 GOLGA7-204ENST00000520817 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 TOP1MT-218ENST00000523676 1982 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 SMIM24-201ENST00000215531 1329 ntAPPRIS P2 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 TOR3A-203ENST00000367627 2724 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 ACTB-201ENST00000331789 1917 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 CAPN15-201ENST00000219611 4744 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 C11orf58-201ENST00000228136 2049 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 BAALC-202ENST00000306391 243 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 BAALC-204ENST00000330955 222 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.02■□□□□ 0.48
HADHAP40939 TNFRSF10C-202ENST00000397703 1242 ntTSL 2 BASIC18.02■□□□□ 0.48
HADHAP40939 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 AL645929.1-201ENST00000420084 975 ntBASIC18.02■□□□□ 0.48
HADHAP40939 ZNF337-AS1-204ENST00000428254 817 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 AP001625.2-201ENST00000442605 575 ntTSL 2 BASIC18.02■□□□□ 0.48
HADHAP40939 AL109797.1-201ENST00000452501 835 ntTSL 2 BASIC18.02■□□□□ 0.48
HADHAP40939 AC010198.1-201ENST00000500076 1552 ntTSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 AC092118.1-202ENST00000568697 718 ntTSL 3 BASIC18.02■□□□□ 0.48
HADHAP40939 GEMIN7-203ENST00000591607 848 ntAPPRIS P1 TSL 3 BASIC18.02■□□□□ 0.48
HADHAP40939 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
HADHAP40939 CDK11B-207ENST00000626918 2457 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 CDK11B-208ENST00000629289 2490 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 CDK11B-209ENST00000629312 2496 ntTSL 5 BASIC18.02■□□□□ 0.48
HADHAP40939 ANKRD20A8P-203ENST00000641373 517 ntBASIC18.02■□□□□ 0.48
HADHAP40939 SRRM2-201ENST00000301740 9353 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
HADHAP40939 MIPEP-201ENST00000382172 2400 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HADHAP40939 PEX14-201ENST00000356607 1985 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HADHAP40939 TUFM-201ENST00000313511 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HADHAP40939 AANAT-201ENST00000250615 1913 ntTSL 1 (best) BASIC18.02■□□□□ 0.47
HADHAP40939 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC18.02■□□□□ 0.47
HADHAP40939 TSPYL5-201ENST00000322128 4491 ntAPPRIS P1 BASIC18.02■□□□□ 0.47
HADHAP40939 LZTS1-203ENST00000522290 1614 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 ZNF346-208ENST00000511834 2306 ntTSL 5 BASIC18.01■□□□□ 0.47
HADHAP40939 HECTD2-203ENST00000371681 2175 ntTSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 ANXA6-201ENST00000354546 2593 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 TCTN1-204ENST00000397659 1885 ntAPPRIS P4 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 TMEM175-222ENST00000622959 1967 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 C9orf66-201ENST00000382387 2918 ntAPPRIS P1 BASIC18.01■□□□□ 0.47
HADHAP40939 DHX33-202ENST00000433302 2225 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 SUSD4-203ENST00000344029 1056 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 SPDYE13P-201ENST00000445314 798 ntBASIC18.01■□□□□ 0.47
HADHAP40939 AC091133.2-201ENST00000505903 428 ntTSL 3 BASIC18.01■□□□□ 0.47
HADHAP40939 AL136038.3-201ENST00000561909 1096 ntBASIC18.01■□□□□ 0.47
HADHAP40939 WDR6-223ENST00000627177 207 ntTSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 ZNF140-207ENST00000440550 1663 ntTSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 DAP3-214ENST00000471642 1671 ntTSL 5 BASIC18.01■□□□□ 0.47
HADHAP40939 UQCC3-201ENST00000377953 1947 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 EMX1-202ENST00000394111 1528 ntTSL 3 BASIC18.01■□□□□ 0.47
HADHAP40939 OLA1-201ENST00000284719 4417 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 KIRREL2-205ENST00000592409 2563 ntAPPRIS ALT2 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 IGF2-204ENST00000381406 5179 ntAPPRIS ALT1 TSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 CRELD2-201ENST00000328268 1357 ntAPPRIS P3 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 AL353692.3-201ENST00000407031 1396 ntBASIC18.01■□□□□ 0.47
HADHAP40939 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 AC104809.2-201ENST00000418218 2274 ntTSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 MCCC1-201ENST00000265594 2545 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 NAA60-201ENST00000360862 2522 ntTSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 UBAP1-203ENST00000379186 2524 ntTSL 5 BASIC18.01■□□□□ 0.47
HADHAP40939 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 TFEB-201ENST00000230323 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 RRAGD-202ENST00000369415 4900 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 MAGEA6-201ENST00000329342 1740 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 MAGEA3-201ENST00000370278 1724 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
HADHAP40939 GOLGA6L10-207ENST00000610657 1705 ntAPPRIS P2 TSL 2 BASIC18.01■□□□□ 0.47
HADHAP40939 CDK16-223ENST00000622098 2968 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 VPS37D-202ENST00000451519 1303 ntTSL 5 BASIC18■□□□□ 0.47
HADHAP40939 ACP6-201ENST00000392988 1555 ntTSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 ACOT7-202ENST00000377842 1813 ntAPPRIS ALT2 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 CAPN1-201ENST00000279247 3007 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 FST-202ENST00000396947 2538 ntTSL 5 BASIC18■□□□□ 0.47
HADHAP40939 MORN1-203ENST00000378531 1798 ntAPPRIS P3 TSL 2 BASIC18■□□□□ 0.47
HADHAP40939 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC18■□□□□ 0.47
HADHAP40939 TSPY12P-201ENST00000421279 868 ntBASIC18■□□□□ 0.47
HADHAP40939 RNF146-204ENST00000476956 884 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 LINC02106-201ENST00000506534 606 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 SDHA-213ENST00000510361 2148 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 GRAMD2B-218ENST00000542322 2977 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC18■□□□□ 0.47
HADHAP40939 VASH1-204ENST00000554743 1096 ntTSL 3 BASIC18■□□□□ 0.47
HADHAP40939 MRPL52-215ENST00000556840 398 ntTSL 2 BASIC18■□□□□ 0.47
HADHAP40939 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC18■□□□□ 0.47
HADHAP40939 AC005332.3-201ENST00000589904 676 ntBASIC18■□□□□ 0.47
HADHAP40939 NTF6B-201ENST00000591913 560 ntBASIC18■□□□□ 0.47
HADHAP40939 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC18■□□□□ 0.47
HADHAP40939 AC009154.2-201ENST00000621177 724 ntBASIC18■□□□□ 0.47
HADHAP40939 AL121956.5-201ENST00000625261 221 ntBASIC18■□□□□ 0.47
HADHAP40939 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC18■□□□□ 0.47
HADHAP40939 FAM110A-202ENST00000304189 1856 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms