Protein–RNA interactions for Protein: P40938

RFC3, Replication factor C subunit 3, humanhuman

Predictions only

Length 356 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3P40938 SEL1L-204ENST00000555824 1631 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 ARPIN-202ENST00000460685 2145 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 AC104581.1-202ENST00000635932 2618 ntBASIC16.27■□□□□ 0.2
RFC3P40938 KCNH1-210ENST00000640044 1818 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 SH3BP2-202ENST00000435136 2318 ntAPPRIS P3 TSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 EIF5-201ENST00000216554 5945 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 INTS10-201ENST00000397977 2804 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 HBA2-201ENST00000251595 605 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 OLFM1-207ENST00000371801 568 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 SMIM29-206ENST00000476320 1297 ntAPPRIS P1 TSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 AL662844.1-201ENST00000546340 181 ntBASIC16.27■□□□□ 0.2
RFC3P40938 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC16.27■□□□□ 0.2
RFC3P40938 AC012615.3-201ENST00000592884 500 ntTSL 3 BASIC16.27■□□□□ 0.2
RFC3P40938 MTDHP3-201ENST00000594186 672 ntBASIC16.27■□□□□ 0.2
RFC3P40938 ZNF772-206ENST00000600175 737 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 TRIB3-202ENST00000422053 1533 ntAPPRIS ALT2 TSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC16.27■□□□□ 0.2
RFC3P40938 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 NOV-201ENST00000259526 2522 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 TBXAS1-204ENST00000416849 2505 ntTSL 5 BASIC16.27■□□□□ 0.2
RFC3P40938 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.2
RFC3P40938 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC3P40938 CBX1-201ENST00000225603 2232 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC3P40938 TBP-202ENST00000392092 1903 ntAPPRIS P3 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC3P40938 INTS4P1-201ENST00000438455 1935 ntBASIC16.27■□□□□ 0.19
RFC3P40938 ZNF846-205ENST00000588267 1943 ntTSL 2 BASIC16.27■□□□□ 0.19
RFC3P40938 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC3P40938 ACSL6-205ENST00000379246 2622 ntTSL 1 (best) BASIC16.27■□□□□ 0.19
RFC3P40938 SNTB1-201ENST00000395601 5164 ntAPPRIS P1 TSL 5 BASIC16.27■□□□□ 0.19
RFC3P40938 MCF2L-208ENST00000397030 6580 ntTSL 2 BASIC16.27■□□□□ 0.19
RFC3P40938 KRT24-201ENST00000264651 1881 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
RFC3P40938 SOWAHC-201ENST00000356454 4657 ntAPPRIS P1 BASIC16.27■□□□□ 0.19
RFC3P40938 AL079301.1-201ENST00000424580 1633 ntTSL 2 BASIC16.27■□□□□ 0.19
RFC3P40938 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 PPP2R2B-203ENST00000394411 2071 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 ADAP1-205ENST00000449296 2093 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 CLEC10A-201ENST00000254868 1797 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 FAM131A-202ENST00000340957 2421 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 DBNDD2-204ENST00000372712 1537 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 HYAL1-203ENST00000395143 1522 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 CCDC17-209ENST00000528266 2181 ntAPPRIS P3 TSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 TXNRD3-202ENST00000523403 2351 ntAPPRIS ALT2 TSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 CSK-202ENST00000439220 1900 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 CCS-201ENST00000310190 942 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 ELK1-202ENST00000343894 736 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 DRAP1-202ENST00000376991 819 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC3P40938 CAMKK2-207ENST00000404169 2116 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 AL022314.1-201ENST00000414203 464 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 TSTD3-201ENST00000452647 962 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 ZNF436-AS1-203ENST00000454117 997 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 AC107464.1-203ENST00000468356 2120 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 AC106795.1-205ENST00000512851 1056 ntBASIC16.26■□□□□ 0.19
RFC3P40938 PENK-208ENST00000523051 772 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 AC021739.5-201ENST00000558637 494 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC3P40938 SMAD3-210ENST00000559092 584 ntTSL 4 BASIC16.26■□□□□ 0.19
RFC3P40938 AC015712.1-203ENST00000559331 593 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC3P40938 IRF8-202ENST00000562492 946 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC3P40938 AC092725.1-201ENST00000565783 499 ntTSL 4 BASIC16.26■□□□□ 0.19
RFC3P40938 GZMM-202ENST00000592501 941 ntTSL 3 BASIC16.26■□□□□ 0.19
RFC3P40938 AC011467.2-201ENST00000598425 242 ntBASIC16.26■□□□□ 0.19
RFC3P40938 AC008878.2-201ENST00000601870 942 ntAPPRIS P1 TSL 4 BASIC16.26■□□□□ 0.19
RFC3P40938 AC120114.3-201ENST00000611923 658 ntBASIC16.26■□□□□ 0.19
RFC3P40938 HNF1B-206ENST00000620125 1103 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 ABBA01031661.1-201ENST00000634362 1253 ntBASIC16.26■□□□□ 0.19
RFC3P40938 RAB34-226ENST00000636772 1180 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 ZNF385A-202ENST00000352268 2076 ntTSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 UAP1-204ENST00000367926 2294 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC16.26■□□□□ 0.19
RFC3P40938 RABL6-201ENST00000311502 3091 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 PITHD1-201ENST00000246151 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 POLR2M-206ENST00000494490 1648 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 GABRB2-206ENST00000520240 2030 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 NR4A1-203ENST00000394824 2639 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 GIPR-201ENST00000263281 1791 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
RFC3P40938 AC027312.1-201ENST00000523591 1571 ntTSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 FAM237A-203ENST00000543490 1376 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
RFC3P40938 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.25■□□□□ 0.19
RFC3P40938 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 ZBTB45-202ENST00000594051 2541 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.25■□□□□ 0.19
RFC3P40938 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.25■□□□□ 0.19
RFC3P40938 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 AC126755.2-202ENST00000427999 1547 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
RFC3P40938 AC135776.1-201ENST00000319817 2481 ntBASIC16.25■□□□□ 0.19
RFC3P40938 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 NDRG2-208ENST00000397851 2022 ntAPPRIS P4 TSL 2 BASIC16.25■□□□□ 0.19
RFC3P40938 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.3 ms